Table 5 Epistatic interaction network
From: High Resolution Mapping of QTLs for Heat Tolerance in Rice Using a 5K SNP Array
S. No. | Traits | Interaction | SNPs | Chr. | Locus | Physical position (bp) | Annotation |
|---|---|---|---|---|---|---|---|
1 | STI sterility | SNP12453-SNP14970 | SNP12453 | 9 | LOC_Os09g29160.1 | 17,733,252–17,731,555 | expressed protein |
SNP14970 | 12 | LOC_Os12g24090.1 | 13,706,157–13,705,072 | expressed protein | |||
2 | STI yield | SNP8401-SNP7118 | SNP8401 | 5 | LOC_Os05g44320.1 | 25,793,638–25,788,753 | WD domain, G-beta repeat domain containing protein, expressed |
SNP7118 | 4 | LOC_Os04g52280.1 | 31,069,545–31,075,601 | dehydrogenase, putative, expressed | |||
SNP7118-SNP3275 | SNP3275 | 2 | LOC_Os02g37380.1 | 22,580,613–22,579,160 | expressed protein | ||
3 | SSI yield | SNP5239-SNP12183 | SNP5239 | 3 | LOC_Os03g38450.1 | 21,344,825–21,346,870 | expressed protein |
SNP12183 | 9 | LOC_Os09g18230.1 | 11,184,420–11,171,639 | expressed protein |