High Resolution Mapping of QTLs for Heat Tolerance in Rice Using a 5K SNP Array

Rice

Table 3 Selection of polymorphic markers for QTL mapping

	Chr1	Chr2	Chr3	Chr4	Chr5	Chr6	Chr7	Chr8	Chr9	Chr10	Chr11	Chr12	Total
No. of Markers after Chi square test at 0.01 significant level	152	120	94	33	105	108	34	51	51	63	62	68	941
% Segregation distortion	25.12	15.49	44.7	79.87	31.81	31.64	68.22	43.95	22.72	24.09	27.9	22.72	37.76
No. of markers per chromosome after removing redundant markers	127	107	83	31	79	98	31	49	43	58	58	60	824
% Redundant markers	16.44	10.83	11.7	6.06	24.76	9.26	8.82	3.92	15.68	7.93	6.45	11.76	12.43
No. of markers used for QTL analysis	127	107	83	31	79	98	31	49	43	58	58	60	824