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Table 8 Phenotypic effect of grain yield QTL and QTL clusters identified in irrigated control conditions

From: Identification of QTLs for yield and agronomic traits in rice under stagnant flooding conditions

qGY12

C3S QTLsb)

C5L QTLsc)

C6C QTLsd)

#RIL

DTF

PH

TN

PN

FLL

FLW

PL

BM

PER

HI

GW

LSL1

LSL2

LSL3

GY

+

NA

NA

NA

32

90

124.0

11

11

31.5

1.88

25.8

1372.2

1.33

0.44

2.71

13.9

21.6

31.5

5910

-

NA

NA

NA

80

89

126.3

10

10

32.2

1.93

26.2

1323.3

1.35

0.43

2.74

14.1

22.6

33.2

5511

NAa)

+

NA

NA

77

91

126.7

10

10

32.5

1.89

25.9

1358.8

1.31

0.42

2.73

14.9

21.9

33.2

5588

NA

-

NA

NA

67

87

124.2

10

10

31.4

1.97

26.4

1290.1

1.37

0.45

2.73

13.4

22.6

32.2

5671

NA

NA

+

NA

83

88

128.3

10

10

32.6

1.96

26.4

1321.8

1.40

0.44

2.72

14.9

22.6

33.4

5729

NA

NA

-

NA

32

90

120.4

10

10

30.8

1.85

25.5

1359.0

1.22

0.42

2.77

13.2

20.8

31.3

5399

NA

NA

NA

+

74

88

125.9

10

10

32.8

1.95

26.6

1337.2

1.37

0.44

2.75

14.2

22.3

32.8

5749

NA

NA

NA

-

32

91

126.2

10

10

31.1

1.85

25.5

1350.7

1.26

0.42

2.70

14.7

22.1

32.0

5470

  1. a)not applied
  2. b)a cluster of QTLs on the top of chromosome 3S
  3. c)a cluster of QTLs on the lower part of chromosome 5L just below qGY5
  4. d)a cluster of QTLs close to the centromeric region of chromosome 6