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Rice
Fig. 5 | Rice

Fig. 5

From: Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome Resequencing

Fig. 5

TreeMix model inference to evaluate the population splits and mixtures among the populations. a Four subpopulations system in Asian rice revealed the relationships of each group. b Four subpopulations system in whole collection revealed the relationships between Asian and African rice. c Six subpopulations system in whole collection revealed the relationships between Asian and African rice. The scale bar shows ten times the average standard error of the estimated entries in the sample covariance matrix. ASW: Asian wild rice, ASC: Asian cultivated rice, AFW: African wild rice, AFC: African cultivated rice, RUF: Asian wild rice O.rufipogon, NIV: Asian wild rice O.nivara, IND: indica type in Asian cultivated rice, JAP: japonica type in Asian cultivated rice

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