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Rice
Fig. 2 | Rice

Fig. 2

From: Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome Resequencing

Fig. 2

Chloroplast genome nucleotide diversity, genetic distance (Fst), and Tajima’s D test. a Nucleotide diversity (pi) and Fst value of four groups. The four circle indicated four groups and the circle size indicated the pi value. The Fst value between each two groups were represented by the distance between them. b, c Average pi and Tajima’s D value of the whole collection and each group. d Tajima’s D test of the overall chloroplast genome in 1kb bins. The sorted values were plotted in each groups. ASW: Asian wild rice, ASC: Asian cultivated rice, AFW: African wild rice, AFC: African cultivated rice

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