Table 2 The LAFBRs that are associated with the field resistance in the three field blast nurseries
From: A Genome-Wide Association Study of Field Resistance to Magnaporthe Oryzae in Rice
LAFBRs | Chr. | Positions | Top SNP | Top SNP genotypes | R associated SNP | MAF (%) | Locus reference |
|---|---|---|---|---|---|---|---|
LAFBR_1 | 1 | 25768623–26002852 | id1015310 | C/T | T | 32.51 | |
LAFBR_2 | 1 | 26034806–26256424 | id1015389 | G/T | T | 31.29 | |
LAFBR_3 | 1 | 28473508–28602492 | id1016715 | A/T | A | 29.90 | |
LAFBR_4 | 1 | 29430517–29612599 | id1017391 | A/G | G | 31.84 | |
LAFBR_5 | 1 | 32130307–32194257 | id1027545 | G/T | T | 14.47 | |
LAFBR_6 | 3 | 11173192–11364668 | id3005883 | G/T | G | 27.91 | |
LAFBR_7 | 4 | 31260971–31367925 | id4010692 | C/G | C | 30.83 | LABR_44 |
LAFBR_8 | 5 | 2450054–2703130 | id5001423 | A/C | C | 27.43 | |
LAFBR_9 | 8 | 5278331–5384087 | id8001749 | A/G | G | 30.83 | LABR_55 |
LAFBR_10 | 8 | 21688770–21871571 | id8006180 | A/G | G | 25.93 | |
LAFBR_11 | 9 | 16850040–17094483 | id9005401 | G/T | T | 33.01 | LABR_71 |
LAFBR_12 | 10 | 16875502–17129435 | id10004848 | C/G | G | 24.47 | |
LAFBR_13 | 10 | 19737153–19958786 | id10006307 | A/C | C | 23.50 | |
LAFBR_14 | 11 | 4415292–4486716 | id11001788 | A/G | G | 29.78 | |
LAFBR_15 | 11 | 23768147–23957505 | id11009444 | C/G | C | 19.55 | |
LAFBR_16 | 12 | 24903601–25001217 | id12009011 | C/T | C | 28.20 |