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Table 4 Primers for InDel markers and SNP markers developed

From: QTL analysis for chalkiness of rice and fine mapping of a candidate gene for qACE9

Primer

Forward (5′-3′)

Reverse (5′-3′)

Type

SNP9-1

AGCATAGTTGTAAAACATGCCAGAC

TGCCGGAAAATAAATTCACCC

SNP

SNP9-2

TTCGTATTTTATAGAACAGAGGG

TGTGTGCTAAGAACACAAAGG

SNP

IND9-3

CAGTATATGTGACGGAGCTATTTTC

ATTATCCTTGGTTATACACCG

InDel

IND9-4

CCAACCTCCAAGACTAGATGAAGTT

AACATTACTTGTGGGCTCTTG

InDel

IND9-5

TTTGATCGGACAATTTGTTT

AAAAACCGGAAAAAGAAAAG

InDel

IND9-6

TAGATGGGCCAGTTCAAATTG

ACCATATGTTTTTACATTTGATTGC

InDel