Table 2 Novel QTLs mapped in IR64 x Azucena population using African and Asian Xanthomonas oryzae pv.oryzae
Xoo a strains | Country of origin | QTL localization: chromosome | QTL name | LODb score | Closely Linked marker | Marker position (cM) | Additive effect | Donor Allele | PVEc (%) |
|---|---|---|---|---|---|---|---|---|---|
MAI1 | Mali | 1 | qABB-1 | 5.068 | RM129 | 58.45 | 1.7 | IR64 | 13.4 |
7 | qABB-7 | 16.006 | RM125 | 5.75 | 3.2 | IR64 | 36.6 | ||
11 | qABB-11 | 4.666 | RM144 | 100.21 | 1.5 | IR64 | 12.4 | ||
BAI4 | Burkina Faso | 7 | qABB-7 | 13.943 | RM125 | 5.75 | 3.5 | IR64 | 33.4 |
11 | qABB-11 | 4.68 | RM144 | 100.21 | 1.8 | IR64 | 12.8 | ||
BAI3 | Burkina Faso | 11 | qABB11 | 5.728 | RM144 | 100.21 | 2.5 | IR64 | 15.3 |
NAI8 | Niger | 9 | qABB-9 | 4.359 | RM242 | 69.28 | 2.3 | IR64 | 12.9 |
10 | qABB-10 | 3.606 | RM294A | 74.36 | -2.23 | Azucena | 10.8 | ||
11 | qABB-11 | 6.03 | RM144 | 100.21 | 2.7 | IR64 | 17.4 | ||
PXO86 | Philippines | 5 | qBB-5 | 4.209 | RM440 | 70.61 | -1.68 | Azucena | 11.5 |
8 | qBB-8-2 | 4.957 | RM281 | 129.96 | -2.16 | Azucena | 13.4 | ||
12 | qBB-12 | 4.869 | RM512 | 38.32 | 1.9 | IR64 | 13.2 | ||
PXO61 | Philippines | 4 | qBB-4 | 3.403 | RM252 | 84.70 | -1.7 | Azucena | 10 |
11 | qABB-11 | 36.78 | RM144 | 100.21 | 7.3 | IR64 | 67.9 |