Table 2 Single nucleotide polymorphism (SNP) found among 2494 rice lines at EBE sites targeted by known TAL effectors
From: Allele mining and enhanced genetic recombination for rice breeding
Gene name | Locus name | Chr | SNP ID | Reference/alternate allele | Frequency of alternate allele in diversity panel (%) |
|---|---|---|---|---|---|
SWEET 11 (Os8N3) | LOC_Os08g42350 | 8 | 26728868 | A/G | 0.2 |
SWEET 14 (Os11N3) | LOC_Os11g31190 | 11 | 18174486 | G/A | 11.2 |
| Â | LOC_Os11g31190 | 11 | 18174499 | G/C | 0.08 |
| Â | LOC_Os11g31190 | 11 | 18174555 | C/A | 0.2 |
SWEET 13 (Os12N3) | LOC_Os12g29220 | 12 | 17305906 | T/G | 7.5 |
| Â | LOC_Os12g29220 | 12 | 17305913 | G/C | 7.1 |