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Table 2 Population structure group of accessions based on Inferred ancestry values

From: Analysis of Population Structure and Genetic Diversity in Rice Germplasm Using SSR Markers: An Initiative Towards Association Mapping of Agronomic Traits in Oryza Sativa

G. no. Genotypes Inferred ancestry Structure group Subtype
   Q1 Q2   
RG1 Mapillai samba 0.977 0.023 SG1 Indica
RG2 CK 275 0.991 0.009 SG1 Indica
RG3 Senkar 0.992 0.008 SG1 Indica
RG4 Murugankar 0.964 0.036 SG1 Indica
RG5 CHIR 6 0.811 0.189 SG1 Indica
RG6 CHIR 5 0.989 0.011 SG1 Indica
RG7 Kudai vazhai 0.975 0.025 SG1 Indica
RG8 CHIR 8 0.759 0.241 SG1 Indica
RG9 Kuruvai kalanjiyam 0.971 0.029 SG1 Indica
RG10 Nava konmani 0.99 0.01 SG1 Indica
RG11 CHIR 10 0.869 0.131 SG1 Indica
RG12 Vellai chithiraikar 0.802 0.198 SG1 Indica
RG13 CHIR 2 0.983 0.017 SG1 Indica
RG14 Jothi 0.992 0.008 SG1 indica
RG15 Palkachaka 0.962 0.038 SG1 indica
RG16 Thooyala 0.934 0.066 SG1 indica
RG17 Chivapu chithiraikar 0.994 0.006 SG1 indica
RG18 CHIR 11 0.976 0.024 SG1 indica
RG19 Koolavalai 0.99 0.01 SG1 indica
RG20 Kalvalai 0.982 0.018 SG1 indica
RG21 Mohini samba 0.963 0.037 SG1 indica
RG22 IR 36 0.989 0.011 SG1 indica
RG23 Koombalai 0.975 0.025 SG1 indica
RG24 Tadukan 0.674 0.326 AD indica
RG25 Sorna kuruvai 0.986 0.014 SG1 indica
RG26 Rascadam 0.637 0.363 AD indica
RG27 Muzhi karuppan 0.991 0.009 SG1 indica
RG28 Kaatukuthalam 0.828 0.172 SG1 indica
RG29 Vellaikattai 0.987 0.013 SG1 indica
RG30 Poongar 0.987 0.013 SG1 indica
RG31 Chinthamani 0.985 0.015 SG1 indica
RG32 Thogai samba 0.975 0.025 SG1 indica
RG33 Malayalathan samba 0.701 0.299 AD indica
RG34 RPHP 125 0.986 0.014 SG1 indica
RG35 CK 143 0.993 0.007 SG1 indica
RG36 Kattikar 0.913 0.087 SG1 indica
RG37 Shenmolagai 0.994 0.006 SG1 indica
RG38 Velli samba 0.887 0.113 SG1 indica
RG39 Kaatu ponni 0.975 0.025 SG1 indica
RG40 kakarathan 0.989 0.011 SG1 indica
RG41 Godavari samba 0.941 0.059 SG1 indica
RG42 Earapalli samba 0.978 0.022 SG1 indica
RG43 RPHP 129 0.01 0.99 SG2 indica
RG44 Mangam samba 0.968 0.032 SG1 indica
RG45 RPHP 105 0.943 0.057 SG1 indica
RG46 IG 4(EC 729639- 121695) 0.977 0.023 SG1 indica
RG47 Machakantha 0.976 0.024 SG1 indica
RG48 Kalarkar 0.992 0.008 SG1 indica
RG49 Valanchennai 0.972 0.028 SG1 indica
RG50 Sornavari 0.957 0.043 SG1 indica
RG51 RPHP 134 0.909 0.091 SG1 indica
RG52 ARB 58 0.987 0.013 SG1 indica
RG53 IR 68144-2B-2-2-3-1-127 0.708 0.292 AD indica
RG54 PTB 19 0.981 0.019 SG1 indica
RG55 IG 67(EC 729050- 120988) 0.957 0.043 SG1 indica
RG56 RPHP 59 0.031 0.969 SG2 Aromatic
RG57 RPHP 103 0.656 0.344 AD Aromatic
RG58 Kodaikuluthan 0.828 0.172 SG1 indica
RG59 RPHP 68 0.981 0.019 SG1 indica
RG60 Rama kuruvaikar 0.985 0.015 SG1 indica
RG61 Kallundai 0.939 0.061 SG1 indica
RG62 Purple puttu 0.994 0.006 SG1 indica
RG63 IG 71(EC 728651- 117588) 0.823 0.177 SG1 aus
RG64 Ottadaiyan 0.994 0.006 SG1 indica
RG65 IG 56(EC 728700- 117658 0.435 0.565 AD Aromatic
RG66 Jeevan samba 0.876 0.124 SG1 indica
RG67 RPHP 106 0.915 0.085 SG1 indica
RG68 IG 63(EC 728711- 117674) 0.049 0.951 SG2 Tropical Japonica
RG69 RPHP 48 0.025 0.975 SG2 Aromatic
RG70 Karthi samba 0.987 0.013 SG1 indica
RG71 IG 27(IC 0590934- 121255) 0.444 0.556 AD indica
RG72 Aarkadu kichili 0.99 0.01 SG1 indica
RG73 Kunthali 0.969 0.031 SG1 indica
RG74 ARB 65 0.83 0.17 SG1 indica
RG75 IG 21(EC 729334- 121355) 0.091 0.909 SG2 japonica
RG76 Matta kuruvai 0.934 0.066 SG1 indica
RG77 Karuthakar 0.994 0.006 SG1 indica
RG78 RPHP 165 0.99 0.01 SG1 indica
RG79 Manavari 0.704 0.296 AD indica
RG80 IG 66(EC 729047- 120985) 0.992 0.008 SG1 indica
RG81 CB-07-701-252 0.977 0.023 SG1 indica
RG82 Thooyamalli 0.994 0.006 SG1 indica
RG83 RPHP 93 0.153 0.847 SG2 indica
RG84 Velsamba 0.99 0.01 SG1 indica
RG85 RPHP 104 0.898 0.102 SG1 indica
RG86 RPHP 102 0.993 0.007 SG1 indica
RG87 IG 40(EC 728740- 117705) 0.98 0.02 SG1 indica
RG88 Saranga 0.988 0.012 SG1 indica
RG89 IR 83294-66-2-2-3-2 0.125 0.875 SG2 japonica
RG90 IG 61(EC 728731- 117696) 0.843 0.157 SG1 indica
RG91 IG 23(EC 729391- 121419) 0.852 0.148 SG1 Aus
RG92 IG 49(EC 729102- 121052) 0.945 0.055 SG1 indica
RG93 uppumolagai 0.987 0.013 SG1 indica
RG94 Karthigai samba 0.993 0.007 SG1 indica
RG95 Jeeraga samba 0.685 0.315 SG1 indica
RG96 RP-BIO-226 0.833 0.167 SG1 indica
RG97 Varigarudan samba 0.975 0.025 SG1 indica
RG98 IG 5(EC 729642- 121698) 0.012 0.988 SG2 japonica
RG99 IG 31(EC 728844- 117829) 0.813 0.187 SG1 indica
RG100 IG 7(EC 729598- 121648) 0.008 0.992 SG2 japonica
RG101 RPHP 52 0.991 0.009 SG1 indica
RG102 Varakkal 0.958 0.042 SG1 indica
RG103 Mattaikar 0.732 0.268 AD indica
RG104 IG 53(EC 728752- 117719) 0.005 0.995 SG2 Temperate japonica
RG105 IG 6(EC 729592- 121642) 0.204 0.796 SG2 Temperate japonica
RG106 Katta samba 0.872 0.128 SG1 indica
RG107 RH2-SM-1-2-1 0.606 0.394 AD indica
RG108 Red sirumani 0.93 0.07 SG1 indica
RG109 Vadivel 0.977 0.023 SG1 indica
RG110 Norungan 0.991 0.009 SG1 indica
RG111 IG 20(EC 729293- 121310) 0.113 0.887 SG2 indica
RG112 IG 35(EC 728858- 117843) 0.027 0.973 SG2 japonica
RG113 IG 45(EC 728768- 117736) 0.017 0.983 SG2 japonica
RG114 RPHP 159 0.008 0.992 SG2 aromatic rice
RG115 IG 43(EC 728788- 117759) 0.992 0.008 SG1 indica
RG116 RPHP 27 0.52 0.48 AD Tropical Japonica
RG117 IG 65(EC 729024- 120958) 0.974 0.026 SG1 indica
RG118 Ponmani samba 0.973 0.027 SG1 indica
RG119 Ganthasala 0.993 0.007 SG1 indica
RG120 Thattan samba 0.949 0.051 SG1 indica
RG121 IG 74(EC 728622- 117517) 0.16 0.84 SG2 japonica
RG122 Kaliyan samba 0.245 0.755 AD indica
RG123 IG 2(EC 729808-121874) 0.56 0.44 AD japonica
RG124 IG 29(EC 728925- 117920) 0.059 0.941 SG2 Tropical Japonica
RG125 RPHP 55 0.963 0.037 SG1 indica
RG126 Kallimadayan 0.984 0.016 SG1 indica
RG127 IG 10(EC 729686- 121743) 0.066 0.934 SG2 aromatic
RG128 IG 75(EC 728587- 117420) 0.008 0.992 SG2 japonica
RG129 IG 38(EC 728742 - 117707) 0.02 0.98 SG2 Tropical japonica
RG130 IG 39(EC 728779- 117750) 0.012 0.988 SG2 indica
RG131 RPHP 90 0.991 0.009 SG1 indica
RG132 IG 33(EC 728938- 117935) 0.162 0.838 SG2 Tropical Japonica
RG133 IG 42(EC 728798- 117774) 0.495 0.505 AD indica
RG134 IG 9(EC 729682- 121739) 0.019 0.981 SG2 indica
RG135 RPHP 161 0.849 0.151 SG1 indica
RG136 IG 8(EC 729601- 121651) 0.883 0.117 SG1 indica
RG137 IG 37(EC 728715- 117678) 0.005 0.995 SG2 Tropical Japonica
RG138 Sigappu kuruvikar 0.979 0.021 SG1 indica
RG139 RPHP 138 0.917 0.083 SG1 indica
RG140 Raja mannar 0.989 0.011 SG1 indica
RG141 IG 44(EC 728762- 117729) 0.134 0.866 SG2 indica
RG142 Sasyasree 0.989 0.011 SG1 indica
RG143 IG 46(IC 471826- 117647) 0.073 0.927 SG2 indica
RG144 Chetty samba 0.993 0.007 SG1 indica
RG145 IG 60(EC 728730- 117695) 0.033 0.967 SG2 indica
RG146 IR 75862-206 0.013 0.987 SG2 Tropical Japonica
RG147 IG 58(EC 728725- 117689) 0.011 0.989 SG2 japonica
RG148 Chinna aduku nel 0.798 0.202 SG1 indica
RG149 RH2-SM-2-23 0.296 0.704 AD indica
RG150 IG 14(IC 517381- 121422) 0.775 0.225 AD indica
RG151 IG 32(EC 728838- 117823) 0.065 0.935 SG2 japonica
RG152 RPHP 47 0.989 0.011 SG1 indica
RG153 Sembilipiriyan 0.933 0.067 SG1 indica
RG154 IG 48(EC 729203- 121195) 0.006 0.994 SG2 indica
RG155 Sona mahsuri 0.889 0.111 SG1 indica
RG156 IG 12(EC 729626- 121681) 0.405 0.595 AD indica
RG157 Karungan 0.602 0.398 AD indica
RG158 IG 13(EC 729640- 121696) 0.143 0.857 SG2 indica
RG159 Sembala 0.934 0.066 SG1 indica
RG160 IG 72(EC 728650- 117587) 0.992 0.008 SG1 indica
RG161 Panamarasamba 0.978 0.022 SG1 indica
RG162 IR 64 0.995 0.005 SG1 indica
RG163 Mikuruvai 0.992 0.008 SG1 indica
RG164 Thillainayagam 0.939 0.061 SG1 indica
RG165 ARB 64 0.843 0.157 SG1 indica
RG166 RPHP 140 0.959 0.041 SG1 indica
RG167 IG 70(EC 729045- 120983) 0.989 0.011 SG1 indica
RG168 Haladichudi 0.993 0.007 SG1 indica
RG169 IG 24(EC 728751- 117718) 0.725 0.275 AD Aus
RG170 RPHP 42 0.981 0.019 SG1 indica
RG171 RPHP 44 0.951 0.049 SG1 indica
RG172 IG 25(EC 729728- 121785) 0.903 0.097 SG1 Tropical Japonica
RG173 IG 73(EC 728627- 117527) 0.991 0.009 SG1 indica
RG174 IG 51(EC 728772- 117742) 0.008 0.992 SG2 Tropical Japonica
RG175 Vellai kudaivazhai 0.786 0.214 SG1 indica
RG176 Kodai 0.906 0.094 SG1 indica
RG177 Kallundaikar 0.951 0.049 SG1 indica
RG178 IG 17(EC 728900- 117889) 0.993 0.007 SG1 indica
RG179 Avasara samba 0.939 0.061 SG1 indica
RG180 IG 59(EC 728729- 117694) 0.093 0.907 SG2 Tropical Japonica
RG181 IG 52(EC 728756- 117723) 0.026 0.974 SG2 Tropical Japonica
RG182 ARB 59 0.779 0.221 SG1 indica
RG183 RPHP 163 0.995 0.005 SG1 indica
RG184 IG 18(EC 728892- 117880) 0.994 0.006 SG1 indica
RG185 RPHP 36 0.915 0.085 SG1 indica
RG186 IG 28(EC 728920- 117914) 0.009 0.991 SG2 Tropical Japonica
RG187 Vadakathi samba 0.986 0.014 SG1 indica
RG188 RPHP 80 0.986 0.014 SG1 indica
RG189 IG 41(EC 728800- 117776) 0.016 0.984 SG2 Tropical japonica
RG190 IG 26(IC 0590943- 121899) 0.422 0.578 SG2 aromatic
RG191 IG 15(EC 728910- 117901) 0.755 0.245 AD indica
RG192 Nootri pathu 0.943 0.057 SG1 indica