Fig. 3
From: Phylogenomics databases for facilitating functional genomics in rice
Case study to evaluate the functionality of phylogenomics tool: Phylogenomics analysis of aquaporin family in rice. Anatomical expression data were integrated into phylogenetic tree context of aquaporin family. Anatomical meta-expression data were generated from ROAD with 34 rice aquaporin genes. Their protein classifications revealed 20 NIPs (green boxes), 12 PIPs (pale-yellow boxes), 10 tonoplast intrinsic proteins (pink boxes), and 8 small basic intrinsic proteins (light-blue boxes). For heatmaps, blue color denotes low expression, black medium level expression and yellow indicates high expression. Numbers indicate estimated evolutionary distances