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Fig. 3 | Rice

Fig. 3

From: Phylogenomics databases for facilitating functional genomics in rice

Fig. 3

Case study to evaluate the functionality of phylogenomics tool: Phylogenomics analysis of aquaporin family in rice. Anatomical expression data were integrated into phylogenetic tree context of aquaporin family. Anatomical meta-expression data were generated from ROAD with 34 rice aquaporin genes. Their protein classifications revealed 20 NIPs (green boxes), 12 PIPs (pale-yellow boxes), 10 tonoplast intrinsic proteins (pink boxes), and 8 small basic intrinsic proteins (light-blue boxes). For heatmaps, blue color denotes low expression, black medium level expression and yellow indicates high expression. Numbers indicate estimated evolutionary distances

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