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Table 3 Information on the genes related to carbon fixation, TCA cycle, oxidative phosphorylation and GS/GOGAT cycle

From: Laser microdissection-based gene expression analysis in the aleurone layer and starchy endosperm of developing rice caryopses in the early storage phase

Category Accession No. Description Reference
Carbon fixation AK059261 Acetyl CoA carboxylase RAP-DBa; Similar to Acetyl-coenzyme A carboxylase. (Os05t0295300-01)
  AF271995 Phosphoenolpyruvate carboxylase 1 Osppc1; Yamamoto et al. 2014
TCA cycle AF302906 Citrate synthase NCBIb; Silva et al. Unpublished.
  AK067183 Aconitase RAP-DBa; Similar to Aconitate hydratase, cytoplasmic (Citrate hydro-lyase) (Aconitase). (Os03t0136900-01). Similar to Aconitate hydratase 2, mitochondrial. (Os03t0136900-02)
  AF155333 NADP-isocitrate dehydrogenase Koyama et al. 1999
  AK100482 Oxoglutarate dehydrogenase RAP-DBa; Similar to 2-oxoglutarate dehydrogenase, E1 component. (Os07t0695800-01)
  AK103525 Succinyl-CoA synthetase RAP-DBa; Similar to Succinyl-CoA synthetase, beta chain. (Os02t0621700-01)
  AB017428 Succinate dehydrogenase SDHB; Kubo et al. 1999b
  AF444195 Malate dehydrogenase 1 MDH; Lin et al. 2003
  AK073698 Malate dehydrogenase 2 RAP-DBa; Similar to Malate dehydrogenase. (Os05t0574400-01)
Oxidative phosphorylation AK058713 NADH-ubiquinone oxidoreductase RAP-DBa; Similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor. (Os03t0713400-01); Similar to NADH-ubiquinone oxidoreductase 75 kDa subunit. (Os03t0713400-02); Similar to NADH-ubiquinone oxidoreductase 75 kDa subunit. (Os03t0713400-03)
  AK243655 NADH-ubiquinone oxidoreductase subunit PSST RAP-DBa; NADH-ubiquinone oxidoreductase subunit PSST (Fragment). (Os05t0533700-01)
  AK119716 Cytochrome b-c1 complex subunit 8 RAP-DBa; Similar to Cytochrome b-c1 complex subunit 8. (Os06t0175900-01)
GS/GOGAT cycle Y12594 Ferredoxin-dependent glutamate synthase (Fd-GOGAT) OsGog1; Mattana et al. Unpublishedb.
  X14245 Cytosolic glutamine synthetase 1;1 GS1; Sakamoto et al. 1989, GS1;1; Tabuchi et al. 2005
  X14244 Cytosolic glutamine synthetase 1;2 GSr; Sakamoto et al. 1989, GS1;2; Tabuchi et al. 2005
  AB008845 NADH dependent Glutamate Synthase Goto et al. 1998
  AY332470 Glutamate dehydrogenase OsGDH1.2; Qiu et al. 2009
  1. aThe Rice Annotation Project Database
  2. bDirect submission to The National Center for Biotechnology Information (NCBI)