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Table 2 Microsatellite markers those are polymorphic between Jalmagna and CRMAS 2232-85

From: Pyramiding of three bacterial blight resistance genes for broad-spectrum resistance in deepwater rice variety, Jalmagna

Chromosome

No. of markers analyzed

Total no. of polymorphic markers

Name of the polymorphic markers

1

25

11

RM23, RM48, RM212, RM272, RM575, RM428, RM488, SSR09, SSR 31, SSR 60 ,SSR 71

2

25

12

RM154, RM211, RM233A, RM263, RM475, RM45, RM530,SSR11, SSR 14, SSR 44 ,SSR 71 ,SSR 85

3

21

10

RM16, RM130, RM218, RM203,SSR 06, SSR 13, SSR 18, SSR 45, SSR 85, SSR 93

4

18

12

RM241, RM307, RM401, RM55, RM471, RM518, RM470,

SSR 04, SSR 10, SSR 19, SSR 32, SSR 40

5

19

12

RM164, RM592, RM440, SSR 05, SSR 13, SSR 21, SSR 27, SSR 34,SSR 37, SSR 43, SSR 50, SSR 59

6

20

10

RM225, RM276, RM340, RM402, RM586, RM589, RM588, SSR 21, SSR 31, SSR 54

7

21

9

RM10, RM336, RM560, RM432, RM346, SSR 28, SSR 37, SSR 41, SSR 44

8

20

10

RM223, RM241, RM407, RM3395, RM6208, RM22550, RM22506, RM8271, SSR 14 ,SSR 48

9

16

7

RM219, RM242, RM257, RM410, RM3555,SSR 40, SSR 42

10

17

9

RM171, RM216, RM333, RM330, SSR 03, SSR 06, SSR 11, SSR 25, SSR 30

11

18

11

RM21, RM144, M202, RM206, RM209, RM260, RM287,

SSR 3, SSR 4, SSR 11, SSR 27

12

17

7

RM17, RM195, RM415, RM23, SSR 23, SSR 26, SSR 36

Total

236

120