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Table 3 QTL associated with cold tolerance in rice

From: Rice and cold stress: methods for its evaluation and summary of cold tolerance-related quantitative trait loci

Name of QTL

Year

Trait for mapping

Chromosome no.

Reference

Ctb1, Ctb2

2001

Spikelet fertility/Undeveloped spikelet

4

(Saito et al. [2001])

qCTB2a, qCTB3

2003

Spikelet fertility/Undeveloped spikelet

2, 3

(Andaya and Mackill [2003b])

qCTS12a

2003

Seedling growth

12

(Andaya and Mackill [2003a])

Ctb1

2004

Spikelet fertility

4

(Saito et al. [2004])

Dth, cl, fer, pe, dc

2004

Days to heading/Culm length/Spikelet fertility/Panicle neck exsertion/Discoloration

1, 3, 5, 6, 7, 8, 9, 11

(Oh et al. [2004])

qSV-3-1/2, -5, -8-1/2

2005

Seedling growth

3, 5, 8

(Zhang et al. [2005])

qLVG2, qLVG7-2, qCIVG7-2

2006

Vigor of germination

2, 7

(Han et al. [2006])

qCTS12

2006

Seedling growth

12

(Andaya and Tai [2006])

qCTS4

2007

Seedling growth

4

(Andaya and Tai [2007])

qCTS-2

2007

Seedling growth

2

(Lou et al. [2007])

qLTG3-1

2008

Vigor of germination

3

(Fujino et al. [2008])

qCTB-1-1, -4-1/2, -5-1/2, -10-1/2, -11-1

2008

Spikelet fertility

1, 4, 5, 10, 11

(Xu et al. [2008])

qCTP11, qCTP12

2009

Vigor of germination

11, 12

(Baruah et al. [2009])

qPSST-3, -7, -9

2010

Spikelet fertility/Growth in reproductive stage

3, 7, 8, 9, 11

(Suh et al. [2010])

Ctb1

2010

Spikelet fertility/Undeveloped spikelet

4

(Saito et al. [2010])

qCtss11

2010

Seedling growth

11

(Koseki et al. [2010])

qCTB-5-1/2/3, -7

2010

Vigor of germination

5, 7

(Lin et al. [2010])

qCTS4a, qCTS4b

2012

Seedling growth

4

(Suh et al. [2012])

qLTB3

2012

Seed fertility

3

(Shirasawa et al. [2012])