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Table 1 General sequencing statistics for Tongil and its parental genomes

From: Defining the genome structure of `Tongil' rice, an important cultivar in the Korean "Green Revolution"

Variety

Number of reads

Total read length (bp)

Mapped read length (bp)

Sequencing depth (×)

Coveragea)(%)

SNP frequency (SNPs/kb)

Tongil

199,543,820

17,339,883,560

330,933,489

47

88.8

5.77

Yukara

114,615,268

12,429,060,750

345,058,384

34

92.6

0.49

IR8

109,304,614

11,790,909,253

327,065,806

32

87.7

6.22

TN1

105,708,026

11,299,286,038

326,132,058

30

87.5

6.04

  1. a)Coverage to Nipponbare genome sequence.
  2. Sequencing and mapping against the Nipponbare reference genome.