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Table 2 Genes upregulated by excess Fe in roots

From: Transcriptomic analysis of rice in response to iron deficiency and excess

Locus

Gene

-Fe/+Fe

-Fe/+Fe

++Fe/+Fe

++Fe/+Fe

Os06g0597600

Aromatic-ring_hydroxylase_family_protein

1.695

1.047

2.401

2.054

Os09g0388400

Cof_protein_family_protein

1.528

0.532

4.731

2.708

Os01g0895300

Cytochrome b561, eukaryote domain containing protein

0.369

0.401

2.098

2.163

Os01g0803800

Cytochrome_P450_family_protein

0.397

0.391

5.581

5.668

Os01g0803900

Cytochrome_P450_family_protein

0.760

0.925

6.990

5.304

Os11g0138300

Cytochrome_P450_family_protei

1.590

2.129

6.240

4.700

Os01g0893700

DOMON_related_domain_containing_protein

0.818

0.756

25.037

23.014

Os01g0895200

DOMON_related_domain_containing_protein

0.312

0.205

3.241

2.876

Os06g0695300

Haem_peroxidase,_plant/fungal/bacterial_family_protein

0.148

0.147

9.393

7.456

Os01g0736500

Harpin-induced_1_domain_containing_protein

1.650

1.563

2.312

1.979

Os04g0542000

HAT_dimerisation_domain_containing_protein

1.942

1.176

2.360

2.143

Os04g0469000

Heavy_metal_transport/detoxification_protein

3.068

3.461

1.986

3.308

Os01g0129600

LBD40,

0.539

0.553

2.823

3.143

Os01g0127000

Multicopper_oxidase,copper_ion_binding

0.040

0.038

10.058

10.692

Os07g0681200

Plant_acid_phosphatase_family_protein

0.522

0.414

2.480

2.531

Os05g0253200

Protein_kinase-like_domain_containing_protein

2.880

1.837

2.600

3.229

Os02g0586000

Quinonprotein_alcohol_dehydrogenase-like_domain

1.112

0.772

3.192

3.130

Os01g0941400

Beta-1,3-glucanase

0.790

0.989

1.982

8.542

Os01g0940700

Glucan_endo-1,3-beta-glucosidase

1.219

1.726

2.520

14.386

Os03g0273200

Similar_to_Laccase_(EC_1.10.3.2) copper_ion_binding

5.600

5.213

2.697

3.305

Os03g0234100

Similar to Non-symbiotic hemoglobin 4 (rHb4)

1.286

1.206

2.168

2.152

Os03g0368300

Similar to Peroxidase 1

0.482

0.529

2.593

2.244

Os03g0369000

Similar to Peroxidase 1

0.763

0.738

2.608

2.861

Os07g0531400

Similar to Peroxidase 27 precursor (EC_1.11.1.7)

0.161

0.097

9.404

8.606

Os01g0795100

Similar to Subtilase.";category_

2.699

2.176

7.865

4.144

Os06g0578100

Von Willebrand factor, type A domain containing protein

0.737

1.932

5.243

5.210

Os11g0687100

Von Willebrand_factor, type A domain containing protein

1.657

3.269

4.657

4.324

Os01g0838600

Zinc finger, C2H2-type domain containing proteinc

3.505

3.445

2.704

2.022

Os02g0582900

Conserved hypothetical protein

0.443

0.263

3.946

3.242

Os04g0438600

Conserved hypothetical protein

1.375

1.398

2.466

2.099

Os04g0538300

Conserved_hypothetical_protein

0.147

0.236

18.160

29.066

Os01g0803600

NONE";category_"NONE

0.661

0.783

3.882

3.204

Os10g0451601

NONE";category_"NONE

2.712

2.123

23.277

14.910

chr2_-_1866365-1866487

sORF

5.403

2.693

4.059

2.612

chr6_ + _23392831-23392944

sORF

0.768

1.221

9.650

7.388

chr6_ + _29900249-29900395

sORF

0.106

0.111

7.392

6.886

  1. The expression of genes listed in Table 2 is up regulated at least two fold in both biological replications.