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Table 1 QTLs associated with leaf bronzing scores after 5 days of Fe 2+ stress exposure in IR29/Pokkali population by single marker regression

From: Genetic and physiological analysis of tolerance to acute iron toxicity in rice

QTLa

Chromosome

Associated markerb

Positionc(Mb)

-logp(F)d

Additive effecte

R2(%)f

Tolerance alleleg

q FETPX-1-1

1

id1008684

12.9

3.57

0.82

10.6

Pokkali

q FETOX-1-2

1

id1021920

36.8

4.23

−0.72

12.7

IR29

1

id1023158

38.2

5.25

−0.81

16.0

q FETOX-2

2

id2013434

31.2

3.47

0.94

10.3

Pokkali

q FETOX-4-1

4

id4002852

7.4

6.12

0.85

18.7

Pokkali

4

id4002913

8.1

6.14

0.86

18.7

4

id4003259

10.0

5.95

0.84

18.1

4

id4003727

12.0

3.15

0.82

9.2

q FETOX-4-2

4

id4005867

20.0

3.37

0.69

9.9

Pokkali

q FETOX-7

7

id7000519

3.7

3.87

1.11

11.7

Pokkali

q FETOX-12

12

id12010050

27.6

3.56

0.96

10.6

Pokkali

  1. aClosely linked markers are assumed as the same QTL.
  2. bMarker associated with QTL.
  3. cPhysical position of markers on chromosomes.
  4. dF-statistical analysis indicates association between markers and trait.
  5. ePositive/negative values indicate IR29/Pokkali can increase trait values.
  6. fProportion of phenotypic variance explained.
  7. gTolerance allele provided by parental line.