Figure 2
From: SNP-based analysis of genetic diversity in anther-derived rice by whole genome sequencing
Classification of SNPs based on locations. Based on the annotation of IRGSP, SNPs and InDels, SNPs were classified as genic or intergenic. Depending on intra-genic locations, ‘genic’ was further separated into CDS, intron, and UTRs. The number and ratio of SNPs in each class is shown. Unknown SNPs were located in the coding region but were not annotated in IRGSP. (a) Dongjin is an elite cultivar in Korea. (b) Hwayeong is a mother cultivar of HY-04, HY-08, and BLB. (c), (d), and (e) were derived from Hwayeong via anther culturing.