Library
|
Typea
|
Original read length (bp)
|
Number of reads
|
---|
Initial purity filtered reads
|
Remaining after low quality trimming
|
Remaining after adaptor trimming
|
Remaining after pairingb
|
---|
NIAS
|
SE
|
36
|
70,387,992
|
59,966,207
|
59,344,842
|
-
|
| |
51
|
60,164,564
|
51,717,577
|
50,981,527
|
-
|
CSHL
|
PE
|
76
|
269,062,790
|
261,197,347
|
257,096,019
|
246,779,548 (10,316,471)
|
- a SE: single-end reads, PE: paired-end reads.
- b The value in parenthesis is the number of unpaired reads for which one of the reads in a pair was discarded during the preprocessing to remove low quality reads.