Table 3 Variation at ctDNA and mtDNA polymorphism
| Â | Variation of stretches | ORF 100-INDEL | mtDNA-INDEL | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site/Collection | Species/Accession | No. of strains | C-absence | C-presence | - | + | - | + | |||||||
15A | 16A | 17A | 18A | 19A | 11A | 14A | 15A | Â | +5Â bp | +10Â bp | Â | Â | |||
Jpn 1 | Australian perennial accesison | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 0 | 3 | 0 |
Jpn 2 | Australian perennial accesison | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 5 | 0 | 5 | 0 |
Jpn 3 | Australian perennial accesison | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 5 | 0 | 5 | 0 |
Jpn 4 | Australian perennial accesison | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 0 | 3 | 0 |
Jpn 10 | Australian perennial accesison | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 0 | 3 | 0 |
Jpn 11 | Australian perennial accesison | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 0 | 3 | 0 |
Core collection | O. meridionalis | 18 | 0 | 0 | 0 | 0 | 0 | 1 | 14 | 3 | 0 | 16 | 2 | 18 | 0 |
Core collection | Asian O. rufipogon | 32 | 6 | 8 | 15 | 2 | 1 | 0 | 0 | 0 | 32 | 0 | 0 | 0 | 32 |
Core collection | Australian O. rufipogon | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 2 | 0 |
Core collection | New Guinean O. rufipogon | 5 | 0 | 1 | 1 | 0 | 0 | 0 | 3 | 0 | 2 | 3 | 0 | 3 | 2 |