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Table 3 Variation at ctDNA and mtDNA polymorphism

From: Molecular relationships between Australian annual wild rice, Oryza meridionalis, and two related perennial forms

  Variation of stretches ORF 100-INDEL mtDNA-INDEL
Site/Collection Species/Accession No. of strains C-absence C-presence - + - +
15A 16A 17A 18A 19A 11A 14A 15A   +5 bp +10 bp   
Jpn 1 Australian perennial accesison 3 0 0 0 0 0 0 0 3 0 3 0 3 0
Jpn 2 Australian perennial accesison 5 0 0 0 0 0 0 0 5 0 5 0 5 0
Jpn 3 Australian perennial accesison 5 0 0 0 0 0 0 0 5 0 5 0 5 0
Jpn 4 Australian perennial accesison 3 0 0 0 0 0 0 0 3 0 3 0 3 0
Jpn 10 Australian perennial accesison 3 0 0 0 0 0 0 0 3 0 3 0 3 0
Jpn 11 Australian perennial accesison 3 0 0 0 0 0 0 0 3 0 3 0 3 0
Core collection O. meridionalis 18 0 0 0 0 0 1 14 3 0 16 2 18 0
Core collection Asian O. rufipogon 32 6 8 15 2 1 0 0 0 32 0 0 0 32
Core collection Australian O. rufipogon 2 0 0 0 0 0 0 0 2 0 2 0 2 0
Core collection New Guinean O. rufipogon 5 0 1 1 0 0 0 3 0 2 3 0 3 2
  1. Adenine stretches beside the C insertion in rp116, nucleotide in 1st intron of rp116 and INDEL in mtDNA.