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Rice
Figure 4 | Rice

Figure 4

From: Development of a novel prediction method of cis-elements to hypothesize collaborative functions of cis-element pairs in iron-deficient rice

Figure 4

Predicted motifs from other microarrays. A, The TGGCGACA motif (containing a ZDRE) attained the highest MAMA score when microarray data generated from rice roots subjected to zinc deficiency were analyzed. B, The CACGTGTC motif (containing the ABRE consensus) attained the highest MAMA score when microarray data generated from Arabidopsis roots subjected to NaCl stress were analyzed. C, The CGACCGAC motif (which contains a DRE) attained the highest MAMA score when human microarray data generated from Arabidopsis roots subjected to NaCl stress were analyzed. D, Cover ratios of the TGGCGACA motif. E, Cover ratios of the CACGTGTC motif. F, Cover ratios of the CGACCGAC motif. G, Distribution of the TGGCGACA motif (upregulated genes, 223; all genes, 29,535). H, Distribution of the ACACGTGT motif (upregulated genes, 335; all genes, 20,767). I, Distribution of the CGACCGAC motif.

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