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Table 1 Identification of GA-responsive proteins in rice leaf

From: Exploring the response of rice (Oryza sativa) leaf to gibberellins: a proteomic strategy

Protein ID

Accession no.

Theor Mr (kD)/pI

Exp. (kD)/pI

Description

Matched/searched peptides

Score

Sequence coverage (%)

Metabolic group

LD1

AAA84588

54.0/5.30

57.6/5.29

AtpB gene product

14/46

139

51

Unknown

LD2

BAC78572

51.8/5.43

51.4/4.91

Ribulose-bisphosphate carboxylase activase large isoform precursor protein

13/28

142

37

Energy

LD3

BAD20105

30.3/11.81

52.5/7.65

Hypothetical protein

7/41

64

37

Unknown

LD4

EAZ34180

8.02/6.84

45.3/4.92

Hypothetical protein OsJ_017663

4/14

71

54

Unknown

LD5

CAG34174

53.3/6.23

31.3/6.26

Ribulose bisphosphate carboxylase large chain

11/77

66

20

Energy

LD6

BAD38069

22.3/9.97

34.8/8.24

Hypothetical protein

10/71

73

54

Unknown

LD7

CAG34174

53.3/6.23

32.3/7.46

Ribulose bisphosphate carboxylase large chain

9/35

79

21

Energy

LD8

BAD35346

13.7/10.25

31.8/6.89

Hypothetical protein

5/29

62

52

Unknown

LD9

ABA99483

120.3/8.37

26.8/8.07

Retrotransposon protein, putative, unclassified

10/28

65

13

Transposons

LD10

BAA31953

29.5/8.41

23.7/7.37

Carbonic anhydrase

6/34

64

30

Energy

LD11

O22386

18.6/5.36

19.3/4.86

50S ribosomal protein L12, chloroplast precursor (CL12)

5/26

66

40

Protein stability

LD12

ABA99483

120.3/8.37

18.0/5.53

Retrotransposon protein, putative, unclassified

10/28

65

13

Transposons

LD13

AAR19268

19.8/9.03

15.6/7.19

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit

12/41

149

62

Energy

LD14

AAR19268

19.8/9.03

15.2/7.69

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit

11/28

145

57

Energy

LD15

AAR19268

19.8/9.03

15.5/5.98

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit

13/43

166

70

Energy

LD16

AAR19268

19.8/9.03

15.5/6.16

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit

11/26

164

57

Energy

LU1

AAB63469

73.7/5.30

79.2/4.91

Endosperm lumenal binding protein

7/10

90

15

Unknown

LU2

AAP53974

90.5/5.09

92.3/5.02

Cell division cycle protein 48, putative, expressed

16/40

118

22

Cell growth/division

LU3

AAP53974

90.5/5.09

92.8/5.07

Cell division cycle protein 48, putative, expressed

20/47

158

27

Cell growth/division

LU4

ABB47613

92.1/6.28

89.6/5.70

Prolyl oligopeptidase family, putative

15/68

83

28

Unknown

LU5

BAD35509

112.4/6.35

95.1/5.89

Putative glycine dehydrogenase

12/22

124

20

Metabolism

LU6

BAC75578

15.5/10.82

89.6/5.82

Hypothetical protein

5/26

65

51

Unknown

LU7

NP_001052057

95.0/5.85

89.6/5.92

Os04g0118400

11/26

106

20

Unknown

LU8

AAX95352

71.5/5.10

74.1/4.89

DnaK-type molecular chaperone hsp70 - rice (fragment)

15/45

96

23

Protein stability

LU9

BAD82294

60.9/5.42

68.9/5.24

Putative phosphoglycerate mutase

14/43

105

30

Energy

LU10

AAR01748

42.2/6.10

65.8/5.24

Methylenetetrahydrofolate reductase, 3-partial

7/23

67

24

Metabolism

LU11

CAE05155

75.4/5.83

65.8/5.48

OSJNBa0039C07.11

12/21

129

22

Unknown

LU12

NP_001043066

62.9/5.68

62.3/5.44

Os01g0372700

15/39

126

26

Unknown

LU13

NP_001049057

60.6/7.25

62.6/5.66

Os03g0163300

10/54

72

25

Unknown

LU14

AAX85991

57.1/4.95

62.8/4.79

Protein disulfide isomerase

15/72

98

34

Protein stability

LU15

AAX85991

57.1/4.95

61.7/4.75

Protein disulfide isomerase

9/34

63

20

Protein stability

LU16

CSRZ

57.1/6.75

62.3/6.99

Catalase (EC 1.11.1.6) catA

7/25

69

23

Defence

LU17

CSRZ

57.1/6.75

61.7/7.25

Catalase (EC 1.11.1.6) catA

19/53

176

51

Defence

LU18

CSRZ

57.1/6.75

61.4/7.65

Catalase (EC 1.11.1.6) catA

12/38

92

27

Defence

LU19

BAC84709

60.6/7.19

58.2/8.20

Receptor protein kinase-related protein-like

6/22

73

15

Signal transduction

LU20

AAM12499

55.2/5.95

57.0/7.63

ATPase alpha subunit

10/42

120

30

Energy

LU21

BAD53795

46.7/5.81

42.8/4.64

Putative aminolevulinate dehydratase

11/70

74

35

Metabolism

LU22

ABF99934

37.3/4.64

52.1/4.51

Ankyrin repeat domain protein 2, putative, expressed

11/35

132

45

Metabolism

LU23

ABD57308

51.8/5.43

56.8/5.22

UDP-glucose pyrophosphorylase

11/59

77

35

Energy

LU24

NP_001047463

45.4/5.98

46.5/5.13

Os02g0621700

16/56

147

48

Unknown

LU25

AAO23563

46.0/5.90

45.8/5.82

Aspartate aminotransferase

21/58

213

59

Metabolism

LU26

EAZ41273

42.0/8.46

42.6/7.18

Hypothetical protein OsJ_024756

7/37

65

24

Unknown

LU27

BAB84334

39.5/7.16

42.6/7.89

UDP-glucuronic acid decarboxylase

11/57

90

44

Energy

LU28

AAA82047

36.6/6.61

40.7/7.79

Glyceraldehyde-3-phosphate dehydrogenase

7/15

100

33

Energy

LU29

AAA82047

36.6/6.61

40.9/7.49

Glyceraldehyde-3-phosphate dehydrogenase

7/21

80

27

Energy

LU30

AAX96859

51.6/9.06

30.7/4.78

Acetolactate synthase, small subunit, putative

9/24

62

16

Metabolism

LU31

BAD35207

34.5/5.61

33.2/4.86

Putative PrMC3

14/41

157

46

Unknown

LU32

BAB71741

32.9/5.51

35.8/5.24

Glyoxalase I

4/16

75

27

Energy

LU33

NP_001060741

27.2/5.21

32.8/4.97

Os07g0694700

9/20

135

58

Unknown

LU34

AAL61542

33.5/5.69

38.5/5.39

Isoflavone reductase-like protein

7/25

85

42

Metabolism

LU35

BAD08085

39.9/6.37

39.5/5.81

Putative ornithine carbamoyltransferase

8/35

75

34

Metabolism

LU36

NP_001053139

36.9/6.34

38.7/6.57

Os04g0486600

8/20

108

39

Unknown

LU37

NP_001053139

36.9/6.34

38.7/7.14

Os04g0486600

12/56

104

45

Unknown

LU38

NP_001054439

31.4/9.13

31.9/6.52

Os05g0110300

7/34

67

22

Unknown

LU39

BAD25718

28.8/5.46

35.1/5.65

Putative porphobilinogen deaminase

7/48

64

35

Metabolism

LU40

ABA93708

85.5/8.06

31.1/5.48

NB-ARC domain, putative

11/31

64

16

Unknown

LU41

BAD36628

23.2/5.72

25.9/4.91

Putative chaperonin 21 precursor

14/42

181

74

Protein stability

LU42

BAB70686

79.6/5.37

20.9/5.07

Ryptochrome 1a

6/26

65

10

Unknown

LU43

BAD32104

24.8/11.92

17.8/5.44

Splicing coactivator subunit-like protein

6/28

65

28

Metabolism

LU44

NP_001042680

21.0/7.77

20.2/5.77

Os01g0266600

6/31

74

54

Unknown

LU45

EAZ35500.1

21.6/8.38

18.1/8.36

Hypothetical protein OsJ_018983

5/15

70

24

Unknown