Toward understanding transcriptional regulatory networks in abiotic stress responses and tolerance in rice

Todaka, Daisuke; Nakashima, Kazuo; Shinozaki, Kazuo; Yamaguchi-Shinozaki, Kazuko

doi:10.1186/1939-8433-5-6

Rice

Table 1 A list of transcription factors (TFs) described in this paper

From: Toward understanding transcriptional regulatory networks in abiotic stress responses and tolerance in rice

Gene name	Tolerance in OX (mutant)	Phenomena or roles in stress response	Reference
OsDREB1 TFs
OsDREB1A	Drought ↑, Salt ↑, Cold ↑	Accumulation of proline and regulation of stress-responsive gene expression	(Ito et al. 2006)
OsDREB1B	Drought ↑, Salt ↑, Cold ↑	Induction of the TF expression in cold stress	(Ito et al. 2006)
OsDREB1F	Drought ↑, Salt ↑, Cold ↑	Regulation of ABA-responsive gene expression	(Wang et al. 2008)
OsDREB1G	Drought ↑	Binding to the DRE element	(Chen et al. 2008)
OsDREB2 TFs
OsDREB2A	Not reported	Induction of the TF expression in heat, drought and salt stresses	(Matsukura et al. 2010)
OsDREB2B	Drought ↑, Heat ↑	Regulation of gene expression via stress-induced alternative splicing	(Matsukura et al. 2010)
OsAREB TFs
TRAB1	Not reported	Regulation of gene expression via phosphorylation in response to ABA	(Hobo et al. 1999; Kagaya et al. 2002)
OsABF2	Drought ↓, Salt ↓, Cold ↓	Modulation of gene expression through an ABA-dependent pathway	(Hossain et al. 2010)
OsABI5	Salt ↓, (Salt ↑)	Regulation of adaptive stress response and plant fertility	(Zou et al. 2008)
OsbZIP23	Drought ↑, Salt ↑	Regulation of expression of genes involved in stress response and tolerance	(Xiang et al. 2008)
ABL1	Not reported	Modulation of ABA and auxin responses	(Yang et al. 2011)
OsbZIP72	Drought ↑	Regulation of ABA responsive gene expression	(Lu et al. 2009)
OsNAC TFs
OsNAC6/SNAC2	Drought ↑, Salt ↑	Regulation of abiotic and biotic stress responsive gene expression	(Nakashima et al. 2007; Hu et al. 2008)
OsNAC5	Salt ↑	Regulation of OsLEA3 expression	(Takasaki et al. 2010; Song et al. 2011)
SNAC1	Drought ↑	Increase of stomatal closure and expression of genes involved in stress tolerance	(Hu et al. 2006)
OsNAC10	Drought ↑	Enhancement of grain yield under drought conditions	(Jeong et al. 2010)
Other TFs
AP37	Drought ↑	Enhancement of grain yield	(Oh et al. 2009)
AP59	Drought ↑	Spikelet disruption	(Oh et al. 2009)
ZFP252	Drought ↑, Salt ↑	Accumulation of proline and sugars	(Xu et al. 2008)
ZFP245	Drought ↑, Cold ↑	Elevation of ROS enzyme activity	(Huang et al. 2009a)
ZFP179	Salt ↑	Accumulation of proline and sugars	(Sun et al. 2010)
DST	(Drought ↑, Salt)	Regulation H202-induced stomatal closure	(Huang et al. 2009b)
OsWRKY45-2	Salt ↓ (Salt ↑)	Regulation of ABA sensitivity	(Tao et al. 2009)
OsTIFY11a	Salt ↑, Mannitol ↑	Regulation seed germination	(Ye et al. 2009)
Osmyb4	Chilling ↑	The TF decreases membrane injury	(Vannini et al. 2004; Park et al. 2010)
OsMYB3R-2	Drought ↑, Salt ↑, Cold ↑	Regulation of G2/M phase specific gene expression	(Dai et al. 2007)

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