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Table 1 Gene-specific primers used in real time quantitative RT-PCR analysis

From: Heritable alteration in salt-tolerance in rice induced by introgression from wild rice (Zizania latifolia)

Gene name

GenBank Accession No.

Forward primer (5′-3′)

Reverse primer (5′-3′)

OsNHX1

AB021878

GTTCAAGAGTTACAACAAAGCACG

CAGCGGGAATACAAAAGCAG

OsNHX2

AY360145

ACCAAGACGAAACACCCCTAC

AACCCAGCAACTACTCCAAGAA

OsHKT1;1

AJ491816

ATTAGCAGAGCACTGTGGAGGAA

CCGACGAACCCGTAGGAAG

OsHKT1;3

AJ491818

CAGTTCATCTACCAAAACAATCCA

AATACCTCACCACCAATCAGCA

OsHKT1;5

DQ148410

TGCCACCTTACACCACTTTCG

TGCCATACGCACTGATAACCTC

OsHKT2;1

AB061311

GCATATTCACCCATTCTGGATTCAGT

CGATGGTGATGAGGCTGGAAAGT

OsSOS1

AY785147

CTCCGTGCTCATAGAATCGC

ATACTCACTCAAGTGGGTCAATACC

OsCBL4

AK101368

GGCATCGTTCGGATTTCAC

GAGATTCGCCTTTCTGCTGTT

OsCIPK24

AK102270

AAGAAGCGGGTGGGGAGGT

GCGGTGGTTGAGGATGGTGT

OsAKT1

AY065970

TACGACCGCCGATACAGAA

CCAAATAAGCCACAAAGAAGG

OsHAK4

AF129485

CGTTCCCATCCGTCAGTAAA

CAGCCTCTGGTCTGGTTCGTC

OsHAK7

AJ427971

GAACTCCAACTTCCTCAAGACG

AGATCATGCCGACTTCGACGAG

OsHAK10

AJ427972

CGCTCTCGGCTGCTTTCCT

TAACCGCCAATCCTGACGC

OsHAK16

AJ427973

AGCGACTGTGTGCTAAACCC

CATAGATGCCAATCCCTGAGA

β-actin

AK101613

ATGCCATTCTCCGTCTT

GCTCCTGCTCGTAGTC

  1. NHX, Na+/H+ exchanger; HKT, high affinity K+ transporter; HAK, KUP/HAK/KT K+ transporter; AKT, low affinity K+ transporter; SOS, salt overly sensitive.