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Table 1 Molecular markers developed in this study

From: Glabrous Rice 1, encoding a homeodomain protein, regulates trichome development in rice

Primer

 

Primer sequence(5′-3′)

Primer types

Genetic distance(cM)

M1

Forward

TGGTTATTTGTTATTTTAGTTGGGTG

InDell

1.38

Reverse

TAGACTAGAGTTGGAGACG

M2

Forward

ACGCACGCCATTACAAAC

SSR

0.44

Reverse

CAGGAGGTGGGCCTCATT

M3

Forward

ACGACCCACCAGCAGATA

InDell

9.43

Reverse

AGGGACGTGAATGAAACT

M4

Forward

GCCCTTGATCCGGTGCTCT

InDell

1.07

Reverse

GTGTTAGATGCGTGTATT

M5

Forward

GGGGAAGCTCATTGTCGG

InDell

0.10

Reverse

CAGTGGTGGAGTCAAAAT

M6

Forward

GTAGTAGTAGGAGCACAGC

InDell

0.07

Reverse

CAATGCTGCATGGTGGTA

M7

Forward

AACAAATCCTCCTGTTCC

CAPS

0.07

Reverse

CGAGCTACTACTCCTGCT

M8

Forward

ATTGCTGGCACATTTTCT

InDell

0.07

Reverse

CATTTTCTTCCTATCTAA

M9

Forward

CTAAGCAAGCTGACGTGTAAT

InDell

0.07

Reverse

AACCAAATAGCACTTTCACA

M10

Forward

TCTGTTTCGTTGGATTAGT

InDell

0.04

 

Reverse

ACGAGGCATTCTTGATGG