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Table 1 Information on functionally characterized genes extracted from each article

From: OGRO: The Overview of functionally characterized Genes in Rice online database

Gene information item Remarks
Gene Unabbreviated gene name
Gene symbol Abbreviated gene name
Major category Corresponds to the criteria used in Q-TARO (Yonemaru et al. 2010; http://qtaro.abr.affrc.go.jp/)
Category of objective character Corresponds to the criteria used in Q-TARO (Yonemaru et al. 2010; http://qtaro.abr.affrc.go.jp/)
Chr Chromosome number
Genome start Corresponds to IRGSP pseudomolecules build 4 (http://rgp.dna.affrc.go.jp/E/IRGSP/Build4/build4.html)
Genome end Corresponds to IRGSP pseudomolecules build 4 (http://rgp.dna.affrc.go.jp/E/IRGSP/Build4/build4.html)
Locus ID RAP locus (Rice Annotation Project 2008; http://rapdb.dna.affrc.go.jp/), MSU Osa1 rice locus (Yuan et al. 2005; http://rice.plantbiology.msu.edu/), osa-miRNA ID (Griffiths-Jones et al. 2008; http://www.mirbase.org/), or GenBank (http://www.ncbi.nlm.nih.gov/genbank/) accession number
Method of isolation The term "natural variation" was used for genes functionally characterized by using cultivars, landraces, or wild relatives. The term "knockdown/overexpression" indicates that the genes were characterized using both knockdown and overexpression transgenic plants.
Objective character Phenotypes described in each of the articles
Reference Identified by the Digital Object Identifier (doi)