Table 6 Summary of polymorphisms for 6 groups of populations according to population structure in Figure 2
Samples | Sample size | Mean no. of allele | Effective number of alleles | Mean genetic diversity | Exp. Heterozygosity | No. of polymorphic loci |
|---|---|---|---|---|---|---|
All | 100 | 5.8 | 1.9 | 0.419 | 0.421 | 19 |
1) Japonica ( red) | 8 | 2.1 | 1.5 | 0.256 | 0.273 | 14 |
2) TGMS ( green) | 8 | 1.7 | 1.5 | 0.239 | 0.257 | 11 |
3) Deep water ( deep blue) | 12 | 2.2 | 1.7 | 0.303 | 0.316 | 13 |
4) IRRI germplasms ( Yellow) | 48 | 2.9 | 1.5 | 0.255 | 0.258 | 15 |
5) The other Oryza species ( Pink) | 5 | 3.1 | 3.0 | 0.565 | 0.661 | 16 |
6) Thai landraces and breeding lines (blue) | 19 | 2.6 | 1.8 | 0.355 | 0.365 | 14 |