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Table 6 Summary of polymorphisms for 6 groups of populations according to population structure in Figure 2

From: Genetic structure of Thai rice and rice accessions obtained from the International Rice Research Institute

Samples Sample size Mean no. of allele Effective number of alleles Mean genetic diversity Exp. Heterozygosity No. of polymorphic loci
All 100 5.8 1.9 0.419 0.421 19
1) Japonica ( red) 8 2.1 1.5 0.256 0.273 14
2) TGMS ( green) 8 1.7 1.5 0.239 0.257 11
3) Deep water ( deep blue) 12 2.2 1.7 0.303 0.316 13
4) IRRI germplasms ( Yellow) 48 2.9 1.5 0.255 0.258 15
5) The other Oryza species ( Pink) 5 3.1 3.0 0.565 0.661 16
6) Thai landraces and breeding lines (blue) 19 2.6 1.8 0.355 0.365 14