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Table 2 SNP, InDel and SV detected among the 7302R genome ( 9311 as the reference)

From: Re-sequencing and genetic variation identification of a rice line with ideal plant architecture

Chr.

SNP

InDel

SV

Chr01

39,674

8,046

483

Chr02

36,901

7,199

231

Chr03

32,756

6,451

327

Chr04

27,159

4,810

282

Chr05

26,229

4,951

236

Chr06

24,092

4,424

225

Chr07

21,525

3,699

118

Chr08

27,935

5,200

421

Chr09

13,531

2,524

114

Chr10

22,382

3,826

253

Chr11

13,777

2,490

193

Chr12

21,666

3,752

213