Table 4 Twenty most frequent domain pairs between interacting partners
Domain IDs in interacting pairs | Domain names | Number of interactions observed | Fold enrichment vs. random |
|---|---|---|---|
PF00400 PF00400 | WD40 : WD40 | 166 | 2.4280 |
PF00271 PF00270 | Helicase C : DEAD | 131 | 8.0228 |
PF00069 PF00069 | Pkinase : Pkinase | 120 | 0.0383 |
PF00227 PF00227 | Proteasome : Proteasome | 114 | 133.8151 |
PF00076 PF00076 | rrm :rrm | 112 | 1.2412 |
PF01486 PF00319 | K-box : SRF-TF | 104 | 30.0497 |
PF00271 PF00271 | Helicase_C : Helicase_C | 101 | 3.5858 |
PF00400 PF00271 | WD40 : Helicase_C | 99 | 2.2560 |
PF00271 PF00076 | Helicase C: rrm | 94 | 1.8646 |
PF01423 PF01423 | Sm : Sm | 91 | 116.3077 |
PF07714 PF00069 | Pkinase_Tyr : Pkinase | 91 | 0.0473 |
PF00270 PF00076 | DEAD : rrm | 74 | 2.5320 |
PF00400 PF00069 | WD40 : Pkinase | 70 | 0.1512 |
PF00400 PF00076 | WD40 : rrm | 70 | 0.8912 |
PF00069 PF00036 | Pkinase : efhand | 70 | 0.1994 |
PF02985 PF00400 | HEAT : WD40 | 65 | 2.5236 |
PF00400 PF00118 | WD40 : cpn60_TCP1 | 62 | 8.8624 |
PF00004 PF00004 | AAA : AAA | 60 | 3.4780 |
PF00400 PF00270 | WD40 : DEAD | 59 | 2.3192 |
PF00270 PF00270 | DEAD : DEAD | 58 | 6.1273 |