TY - JOUR AU - Bailey-Serres, J. AU - Fukao, T. AU - Ronald, P. AU - Ismail, A. AU - Heuer, S. AU - Mackill, D. PY - 2010 DA - 2010// TI - Submergence Tolerant Rice: SUB1’s Journey from Landrace to Modern Cultivar JO - Rice VL - 3 UR - https://doi.org/10.1007/s12284-010-9048-5 DO - 10.1007/s12284-010-9048-5 ID - Bailey-Serres2010 ER - TY - JOUR AU - Bailey-Serres, J. AU - Voesenek, L. A. C. J. PY - 2008 DA - 2008// TI - Flooding stress: acclimations and genetic diversity JO - Ann Rev Plant Biol VL - 59 UR - https://doi.org/10.1146/annurev.arplant.59.032607.092752 DO - 10.1146/annurev.arplant.59.032607.092752 ID - Bailey-Serres2008 ER - TY - JOUR AU - Bailey-Serres, J. AU - Voesenek, L. A. C. J. PY - 2010 DA - 2010// TI - Life in the balance: a signaling network controlling survival of flooding JO - Curr Opin Plant Biol VL - 13 UR - https://doi.org/10.1016/j.pbi.2010.08.002 DO - 10.1016/j.pbi.2010.08.002 ID - Bailey-Serres2010 ER - TY - JOUR AU - Chen, X. AU - Visser, E. J. W. AU - de Kroon, H. AU - Pierik, R. AU - Voesenek, L. A. C. J. AU - Huber, H. PY - 2011 DA - 2011// TI - Fitness consequences of natural variation in flooding induced shoot elongation in Rumex palustris JO - New Phytol VL - 190 UR - https://doi.org/10.1111/j.1469-8137.2010.03639.x DO - 10.1111/j.1469-8137.2010.03639.x ID - Chen2011 ER - TY - JOUR AU - Crawford, R. M. M. PY - 1996 DA - 1996// TI - Whole plant adaptation to fluctuating water tables JO - Folia Geobot Phytotax VL - 31 UR - https://doi.org/10.1007/BF02803990 DO - 10.1007/BF02803990 ID - Crawford1996 ER - TY - JOUR AU - Das, K. K. AU - Panda, D. AU - Sarkar, R. K. AU - Reddy, J. N. AU - Ismail, A. M. PY - 2009 DA - 2009// TI - Submergence tolerance in relation to variable floodwater conditions in rice JO - Environ Exp Bot VL - 66 UR - https://doi.org/10.1016/j.envexpbot.2009.02.015 DO - 10.1016/j.envexpbot.2009.02.015 ID - Das2009 ER - TY - JOUR AU - Das, K. K. AU - Sarkar, R. K. AU - Ismail, A. M. PY - 2005 DA - 2005// TI - Elongation ability and non-structural carbohydrate levels in relation to submergence tolerance in rice JO - Plant Sci VL - 168 UR - https://doi.org/10.1016/j.plantsci.2004.07.023 DO - 10.1016/j.plantsci.2004.07.023 ID - Das2005 ER - TY - JOUR AU - Douglas, I. PY - 2009 DA - 2009// TI - Climate change, flooding and food security in south Asia JO - Food Sec VL - 1 UR - https://doi.org/10.1007/s12571-009-0015-1 DO - 10.1007/s12571-009-0015-1 ID - Douglas2009 ER - TY - JOUR AU - Fukao, T. AU - Bailey-Serres, J. PY - 2008 DA - 2008// TI - Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellins responses in rice JO - Proc Natl Acad Sci USA VL - 105 UR - https://doi.org/10.1073/pnas.0807821105 DO - 10.1073/pnas.0807821105 ID - Fukao2008 ER - TY - JOUR AU - Fukao, T. AU - Harris, T. AU - Bailey-Serres, J. PY - 2009 DA - 2009// TI - Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice JO - Ann Bot VL - 103 UR - https://doi.org/10.1093/aob/mcn172 DO - 10.1093/aob/mcn172 ID - Fukao2009 ER - TY - JOUR AU - Fukao, T. AU - Xu, K. AU - Ronald, P. C. AU - Bailey-Serres, J. PY - 2006 DA - 2006// TI - A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice JO - Plant Cell VL - 18 UR - https://doi.org/10.1105/tpc.106.043000 DO - 10.1105/tpc.106.043000 ID - Fukao2006 ER - TY - JOUR AU - Hattori, Y. AU - Nagai, K. AU - Furukawa, S. AU - Song, X. J. AU - Kawano, R. AU - Sakakibara, H. AU - Wu, J. AU - Matsumoto, T. AU - Yoshimura, A. AU - Kitano, H. AU - Matsuoka, M. AU - Mori, H. AU - Ashikari, M. PY - 2009 DA - 2009// TI - The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water JO - Nature VL - 460 UR - https://doi.org/10.1038/nature08258 DO - 10.1038/nature08258 ID - Hattori2009 ER - TY - JOUR AU - Hattori, Y. AU - Miura, K. AU - Asano, K. AU - Yamamoto, E. AU - Mori, H. AU - Kitano, H. AU - Matsuoka, M. AU - Ashikari, M. PY - 2007 DA - 2007// TI - A major QTL confers rapid internode elongation in response to water rise in deepwater rice JO - Breed Sci VL - 57 UR - https://doi.org/10.1270/jsbbs.57.305 DO - 10.1270/jsbbs.57.305 ID - Hattori2007 ER - TY - JOUR AU - Hattori, Y. AU - Nagai, K. AU - Mori, H. AU - Kitano, H. AU - Matsuoka, M. AU - Ashikari, M. PY - 2008 DA - 2008// TI - Mapping of three QTL that regulate internode elongation in deepwater rice JO - Breed Sci VL - 58 UR - https://doi.org/10.1270/jsbbs.58.39 DO - 10.1270/jsbbs.58.39 ID - Hattori2008 ER - TY - JOUR AU - Iftekharuddaula, K. M. AU - Newaz, M. A. AU - Salam, M. A. AU - Ahmed, H. U. AU - Mahbub, M. A. A. AU - Septiningsih, E. M. AU - Collard, B. C. Y. AU - Sanchez, D. L. AU - Pamplona, A. M. AU - Mackill, D. J. PY - 2011 DA - 2011// TI - Rapid and high-precision marker assisted backcrossing to introgress the SUB1 QTL into BR11, the rainfed lowland rice mega variety of Bangladesh JO - Euphytica VL - 178 UR - https://doi.org/10.1007/s10681-010-0272-2 DO - 10.1007/s10681-010-0272-2 ID - Iftekharuddaula2011 ER - TY - CHAP PY - 2010 DA - 2010// TI - Climate change and India: a 4x4 assessment, a sectoral and regional analysis for 2030s BT - Ministry of Environment and Forests, Government of India ID - ref16 ER - TY - CHAP AU - Ismail, A. M. AU - Thompson, M. J. AU - Gergara, G. V. AU - Rahman, M. A. AU - Singh, R. K. AU - Gregorio, G. B. AU - Mackill, D. J. ED - Hoanh Chu, T. ED - Szuster, B. W. ED - Suan-peng, K. ED - Ismail, A. M. ED - Noble, A. D. PY - 2010 DA - 2010// TI - Designing resilient rice varieties for coastal deltas using modern breeding tools BT - Tropical Deltas and Coastal Zones: Food production, communities and environment at the land-water interface PB - CABI CY - Oxfordshire UR - https://doi.org/10.1079/9781845936181.0154 DO - 10.1079/9781845936181.0154 ID - Ismail2010 ER - TY - JOUR AU - Luo, F. -. L. AU - Nagel, K. A. AU - Scharr, H. AU - Zeng, B. AU - Schurr, U. AU - Matsubara, S. PY - 2011 DA - 2011// TI - Recovery dynamics of growth, photosynthesis and carbohydrate accumulation after de-submergence: a comparison between two wetland plants showing escape and quiescence strategies JO - Ann Bot VL - 107 UR - https://doi.org/10.1093/aob/mcq212 DO - 10.1093/aob/mcq212 ID - Luo2011 ER - TY - JOUR AU - Mackill, D. J. AU - Ismail, A. M. AU - Pamplona, A. M. AU - Sanchez, D. L. AU - Carandang, J. J. AU - Septiningsih, E. M. PY - 2010 DA - 2010// TI - Stress Tolerant Rice Varieties for Adaptation to a Changing Climate JO - Crop Environ Bioinforma VL - 7 ID - Mackill2010 ER - TY - JOUR AU - Nagai, K. AU - Hattori, Y. AU - Ashikari, M. PY - 2010 DA - 2010// TI - Stunt or elongate? Two opposite strategies by which rice adapts to floods JO - J Plant Res VL - 123 UR - https://doi.org/10.1007/s10265-010-0332-7 DO - 10.1007/s10265-010-0332-7 ID - Nagai2010 ER - TY - JOUR AU - Neeraja, C. AU - Maghirang-Rodriguez, R. AU - Pamplona, A. M. AU - Heuer, S. AU - Collard, B. AU - Septiningsih, E. AU - Vergara, G. AU - Sanchez, D. AU - Xu, K. AU - Ismail, A. AU - Mackill, D. PY - 2007 DA - 2007// TI - A marker-assisted backcross approach for developing submergence-tolerance rice cultivars JO - Theor Appl Genet VL - 115 UR - https://doi.org/10.1007/s00122-007-0607-0 DO - 10.1007/s00122-007-0607-0 ID - Neeraja2007 ER - TY - JOUR AU - Panda, D. AU - Rao, D. N. AU - Sharma, S. G. AU - Strasser, R. J. AU - Sarkar, R. K. PY - 2006 DA - 2006// TI - Submergence effects on rice genotypes during seedling stage: Probing of submergence driven changes of photosystem 2 by chlorophyll a fluorescence induction O-J-I-P transients JO - Photosynthetica VL - 44 UR - https://doi.org/10.1007/s11099-005-0200-1 DO - 10.1007/s11099-005-0200-1 ID - Panda2006 ER - TY - JOUR AU - Panda, D. AU - Sharma, S. G. AU - Sarkar, R. K. PY - 2007 DA - 2007// TI - Chlorophyll fluorescence transient analysis and its association with submergence tolerance in rice (Oryza sativa) JO - Indian J Agric Sci VL - 77 ID - Panda2007 ER - TY - JOUR AU - Panda, D. AU - Sharma, S. G. AU - Sarkar, R. K. PY - 2008 DA - 2008// TI - Fast chlorophyll fluorescence transients as selection tools for submergence tolerance in rice (Oryza sativa) JO - Indian J Agric Sci VL - 78 ID - Panda2008 ER - TY - JOUR AU - Panda, D. AU - Sharma, S. G. AU - Sarkar, R. K. PY - 2008b DA - 2008b// TI - Chlorophyll fluorescence parameters, CO2 photosynthetic rate and regeneration capacity as a result of complete submergence and subsequent re-emergence in rice (Oryza sativa L.) JO - Aqua Bot VL - 88 UR - https://doi.org/10.1016/j.aquabot.2007.08.012 DO - 10.1016/j.aquabot.2007.08.012 ID - Panda2008b ER - TY - JOUR AU - Pierik, R. AU - van Aken, J. M. AU - Voesenek, L. A. C. J. PY - 2009 DA - 2009// TI - Is elongation-induced leaf emergence beneficial for submerged Rumex species? JO - Ann Bot VL - 103 UR - https://doi.org/10.1093/aob/mcn143 DO - 10.1093/aob/mcn143 ID - Pierik2009 ER - TY - JOUR AU - Porra, R. J. PY - 2002 DA - 2002// TI - The chequered history of the development and use of simultaneous equations for accurate determination of chlorophylls a and b JO - Photosyn Res VL - 73 UR - https://doi.org/10.1023/A:1020470224740 DO - 10.1023/A:1020470224740 ID - Porra2002 ER - TY - JOUR AU - Sarkar, R. K. AU - De, R. N. AU - Reddy, J. N. AU - Ramakrishnayya, G. PY - 1996 DA - 1996// TI - Studies on the submergence tolerance mechanism in relation to carbohydrate, chlorophyll and specific leaf weight in rice (Oryza sativa L.) JO - J Plant Physiol VL - 149 UR - https://doi.org/10.1016/S0176-1617(96)80344-0 DO - 10.1016/S0176-1617(96)80344-0 ID - Sarkar1996 ER - TY - JOUR AU - Sarkar, R. K. AU - Panda, D. PY - 2009 DA - 2009// TI - Distinction and characterisation of submergence tolerant and sensitive rice cultivars, probed by the fluorescence OJIP rise kinetics JO - Func Plant Biol VL - 36 UR - https://doi.org/10.1071/FP08218 DO - 10.1071/FP08218 ID - Sarkar2009 ER - TY - JOUR AU - Sarkar, R. K. AU - Panda, D. AU - Reddy, J. N. AU - Patnaik, S. S. C. AU - Mackil, D. J. AU - Ismail, A. M. PY - 2009b DA - 2009b// TI - Performance of submergence tolerant rice (Oryza sativa) genotypes carrying the Sub1 quantitative trait locus under stressed and non-stressed natural field conditions JO - Indian J Agric Sci VL - 79 ID - Sarkar2009b ER - TY - CHAP AU - Sarkar, R. K. AU - Reddy, J. N. AU - Das, K. K. AU - Ram, P. C. AU - Singh, P. N. AU - Mazid, M. A. AU - Sommut, W. AU - Pane, H. AU - Sharma, S. G. AU - Ismail, A. M. ED - Haefele, S. M. ED - Ismail, A. M. PY - 2009a DA - 2009a// TI - Biophysical constraints in flood-prone ecosystems: impacts and prospects for enhancing and sustaining productivity BT - Natural resource management for poverty reduction and environmental sustainability in fragile rice-based systems PB - International Rice Research Institute CY - Philippines ID - Sarkar2009a ER - TY - JOUR AU - Sarkar, R. K. AU - Reddy, J. N. AU - Sharma, S. G. AU - Ismail, A. M. PY - 2006 DA - 2006// TI - Physiological basis of submergence tolerance in rice and implications for crop improvement JO - Curr Sci VL - 91 ID - Sarkar2006 ER - TY - JOUR AU - Septiningsih, E. M. AU - Pamplona, A. M. AU - Sanchez, D. L. AU - Neeraja, C. N. AU - Vergara, G. V. AU - Heuer, S. AU - Ismail, A. M. AU - Mackill, D. J. PY - 2009 DA - 2009// TI - Development of submergence tolerant rice cultivars: the Sub1 locus and beyond JO - Ann Bot VL - 103 UR - https://doi.org/10.1093/aob/mcn206 DO - 10.1093/aob/mcn206 ID - Septiningsih2009 ER - TY - JOUR AU - Singh, N. AU - Dang, T. T. M. AU - Vergara, G. V. AU - Pandey, D. V. AU - Sanchez, D. AU - Neeraja, C. N. AU - Septiningsih, E. M. AU - Mendioro, M. AU - Tecson-Mendoza, E. M. AU - Ismail, A. M. AU - Mackill, D. J. AU - Heuer, S. PY - 2010 DA - 2010// TI - Molecular marker survey and expression analyses of the rice submergence-tolerance gene SUB1A JO - Theor Appl Genet VL - 121 UR - https://doi.org/10.1007/s00122-010-1400-z DO - 10.1007/s00122-010-1400-z ID - Singh2010 ER - TY - JOUR AU - Singh, S. AU - Mackill, D. J. AU - Ismail, A. M. PY - 2009 DA - 2009// TI - Responses of SUB1 rice introgression lines to submergence in the field: yield and grain quality JO - Field Crops Res VL - 113 UR - https://doi.org/10.1016/j.fcr.2009.04.003 DO - 10.1016/j.fcr.2009.04.003 ID - Singh2009 ER - TY - JOUR AU - Unnikrishnan, A. S. AU - Kumar, R. K. AU - Fernandes, S. E. AU - Michael, G. S. AU - Patwardhan, S. K. PY - 2006 DA - 2006// TI - Sea level changes along the Indian coast: Observations and projections JO - Curr Sci VL - 90 ID - Unnikrishnan2006 ER - TY - JOUR AU - Voesenek, L. A. C. J. AU - Rijnders, J. H. G. M. AU - Peeters, A. J. M. AU - van de Steeg, H. M. AU - de Kroon, H. PY - 2004 DA - 2004// TI - Plant hormones regulate fast shoot elongation under water: from genes to communities JO - Ecology VL - 85 UR - https://doi.org/10.1890/02-740 DO - 10.1890/02-740 ID - Voesenek2004 ER - TY - JOUR AU - Wassmann, R. AU - Jagadish, S. V. K. AU - Heuer, S. AU - Ismail, A. M. AU - Redona, E. AU - Serraj, R. AU - Singh, R. K. AU - Howell, G. AU - Pathak, H. AU - Sumfleth, K. PY - 2009 DA - 2009// TI - Climate Change Affecting Rice Production: The Physiological and Agronomic Basis for Possible Adaptation Strategies JO - Adv Agron VL - 101 ID - Wassmann2009 ER - TY - JOUR PY - 2008 DA - 2008// TI - Climate Change Impacts in Drought and Flood Affected Areas: Case Studies in India JO - Climate Change Impacts in Drought and Flood Affected Areas: Case Studies in India VL - Report No. 43946-IN ID - ref39 ER - TY - JOUR AU - Xu, K. AU - Mackill, D. J. PY - 1996 DA - 1996// TI - A major locus for submergence tolerance mapped on rice chromosome 9 JO - Mol Breed VL - 2 UR - https://doi.org/10.1007/BF00564199 DO - 10.1007/BF00564199 ID - Xu1996 ER - TY - JOUR AU - Xu, K. AU - Xia, X. AU - Fukao, T. AU - Canlas, P. AU - Maghirang-Rodriguez, R. AU - Heuer, S. AU - Ismail, A. M. AU - Bailey-Serres, J. AU - Ronald, P. C. AU - Mackill, D. J. PY - 2006 DA - 2006// TI - Sub1A is an ethylene response factor-like gene that confers submergence tolerance to rice JO - Nature VL - 442 UR - https://doi.org/10.1038/nature04920 DO - 10.1038/nature04920 ID - Xu2006 ER - TY - BOOK AU - Yoshida, S. AU - Forno, D. AU - Cock, J. AU - Gomez, K. A. PY - 1976 DA - 1976// TI - Laboratory Manual for Physiological Studies of Rice PB - International Rice Research Institute CY - Philippines ID - Yoshida1976 ER -