Deep and Comparative Transcriptome Analysis of Rice Plants Infested by the Beet Armyworm (Spodoptera exigua) and Water Weevil (Lissorhoptrus oryzophilus)

Venu, R. C.; Sheshu Madhav, M.; Sreerekha, M. V.; Nobuta, Kan; Zhang, Yuan; Carswell, Peter; Boehm, Michael J.; Meyers, Blake C.; Korth, Kenneth L.; Wang, Guo-Liang

doi:10.1007/s12284-010-9037-8

Rice

Table 5 List of Defense-Related Genes Specifically and Commonly Induced in the Host After Beet Armyworm and Water Weevil Infestations

From: Deep and Comparative Transcriptome Analysis of Rice Plants Infested by the Beet Armyworm (Spodoptera exigua) and Water Weevil (Lissorhoptrus oryzophilus)

ID	Signature	PLA	PLW	PLC	NLD	Gene ID	Gene description
Genes commonly induced in both PLA and PLW
1	GATCTGTGTGATATACA	246	181	0	0	Os01g04050	Bowman–Birk-type wound-induced proteinase inhibitor WIP1 precursor
2	GATCGATTTCATTTGGG	206	119	11	0	Os05g31750	Annexin-like protein RJ4
3	GATCACAGTGTAGCGTG	178	526	2	0	Os12g37260	Lipoxygenase 2.1, chloroplast precursor
4	GATCCTGATTTAAGGCA	176	89	0	8	Os03g07370	Endonuclease/nucleic acid binding protein
5	GATCTGTAATTCGAGTT	146	218	0	0	Os07g43560	CRK10
6	GATCGTCGCGGAGGTGG	101	130	0	0	Os02g50770	Peroxidase 65 precursor
7	GATCGTGTGGTGGAGAG	82	132	2	0	Os04g27790	Terpene synthase 8
8	GATCATCAGAATTTGGT	70	102	18	3	Os07g39480	OsWRKY78—superfamily of rice TFs having WRKY and zinc finger domains
9	GATCCTGCCACTTGCCC	69	127	0	17	Os08g09860	FMN-dependent dehydrogenase family protein
10	GATCCAGTTACAAGTGA	65	145	2	0	Os01g05650	Metallothionein-like protein type 2
11	GATCATCCTCGCGGCGC	60	141	4	0	Os01g60730	RING-H2 finger protein ATL5A
12	GATCTATTCGTCTATCG	60	172	0	0	Os01g03320	Bowman–Birk-type bran trypsin inhibitor precursor
Genes specifically induced in PLA
13	GATCATGTAAACTGTGG	231	0	0	0	Os07g40860	Vegetative cell wall protein gp1 precursor
14	GATCCATGGGCTGTACT	206	0	2	0	Os08g44020	Lyase
15	GATCAGTGGCAAGAAAC	174	0	0	0	Os12g44310	9,10-9,10 carotenoid cleavage dioxygenase 1
16	GATCTCTGCGCATGGTT	170	0	0	0	Os03g22810	Superoxide dismutase 1
17	GATCGACTTCTCCCATC	124	0	0	0	Os06g24990	Xylanase inhibitor protein 1 precursor
18	GATCGGCCACGACGACA	111	0	0	0	Os07g01660	Disease resistance response protein 206
19	GATCCGATGCTGTGTTG	103	25	12	0	Os08g04170	Zinc finger C-x8-C-x5-C-x3-H type family protein
20	GATCAACGAATTCAGCC	146	44	4	0	Os02g41860	Aquaporin PIP2.2
Genes specifically induced in PLW
21	GATCTGCGATGAACTGA	0	212	0	3	Os05g11320	Metallothionein-like protein type 3
22	GATCCACACAGTATAGC	0	195	0	0	Os06g16420	Amino acid transporter-like protein
23	GATCTCAGGGCGGAGGC	0	160	0	0	Os02g53420	Heat shock 70 kDa protein, mitochondrial precursor
24	GATCGAGCGCGCGTTCG	0	249	0	0	Os07g07320	Glutathione-S-transferase GSTU6
25	GATCAGCAGGATTAGGT	0	140	6	5	Os02g42690	Zinc finger, C3HC4-type family protein
26	GATCCTATGTTCAAAGA	9	147	0	0	Os02g40240	Leucine-rich repeat receptor protein kinase EXS precursor
27	GATCGCTCAATTTTTCC	9	141	11	13	Os05g48970	C-terminal zinc finger
28	GATCATCTCGGCCGGGT	9	251	7	13	Os04g57880	DnaJ domain-containing protein
29	GATCTGTTTTGTTTGGT	2	108	14	10	Os06g03800	Ankyrin repeat domain-containing protein 28
30	GATCCCCAAGTCGGCGT	11	110	4	0	Os02g46970	4-coumarate–CoA ligase 2

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