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Table 1 Statistics of Insect-Infested and Control Rice MPSS and SBS Libraries

From: Deep and Comparative Transcriptome Analysis of Rice Plants Infested by the Beet Armyworm (Spodoptera exigua) and Water Weevil (Lissorhoptrus oryzophilus)

Technology

MPSS

SBS

Signature category

Beet armyworm-infested plants (PLA)

Water weevil-infested plants (PLW)

Mechanical wounded plants (PLC)

Unwounded control plants (NLD)

Water weevil-infested plants (SPLW)

Total sequenced

1,150,869

1,012,170

1,213,577

1,254,824

3,051,005

Distinct

21,365

20,282

18,202

20,791

99,837

Reliable

18,311

18,593

17,048

18,659

64,332

Unreliable

3,054

1,689

1,154

2,132

35,505

Significant

15,326

16,673

14,259

14,901

33,123

Nonsignificant

6,039

3,609

3,943

5,890

66,714

Reliable significant

14,480

15,912

13,779

14,395

31,955

Reliable nonsignificant

3,831

2,681

3,269

4,264

32,377

Unreliable significant

846

761

480

506

1,168

Unreliable nonsignificant

2,208

928

674

1,626

34,337

Distinct genes expresseda

7,941

8,871

7,738

8,146

13,964

1–100 TPM

19,370

17,865

16,147

18,132

96,570

101–1,000 TPM

1,826

2,251

1,874

2,497

3,002

1,001–10,000 TPM

160

160

168

153

254

>10,000 TPM

9

6

13

9

11

  1. aGenome-matched reliable significant signatures