Potential Candidate Genes for Improving Rice Disease Resistance

Delteil, Amandine; Zhang, Jie; Lessard, Philippe; Morel, Jean-Benoit

doi:10.1007/s12284-009-9035-x

Rice

Table 1 Rice Genes Potentially Useful for Improving Rice Disease Resistance

From: Potential Candidate Genes for Improving Rice Disease Resistance

Gene			Transgenic plant				Disease reduction			Isolate tested		Enhanced defense expression		Side effects	References	Accession	QTL
Name	Annotation	Type	Genotype	Japonica/Indica	Expression	Type	M. oryzae	X. oryzae pv oryzae	Other pathogens or pes	M. oryzae	X. oryzae pv oryzae	Before infection	After infection	Side effects	References	Accession	QTL
OsBRR1	LRR-RLK	Receptor	Nipponbare	Japonica	Constitutive	OX	80%	nd	nd	3	nd	nd	nd	None	Peng et al. 2009	Os03g12730	Yes
Pi9	NBS-LRR	Receptor	TP309	Japonica	From own promoter	OX	Yes	nd	nd	21	nd	nd	nd	nd	Qu et al. 2006	Os06g17920	Yes
OsWAK1	Protein kinase	Receptor	Aichiasahi	Japonica	Constitutive	OX	50%	nd	nd	nd	nd	nd	nd	None	Li et al. 2009	Os11g46900	Yes
OsMAPK5a /BIMK1/OsMP K5	MAP kinase	Signaling	Nipponbare	Japonica	Constitutive	RNAi	85%	nd	85% (Burkholderia glumae )	nd	nd	+	nd	Susceptible to abiotic stress	Xiong and Yang 2003; Song and Goodman 2002	Os03g17700	Yes
OsSpl11	U-bOX/Armadillo Repeat Protein Endowed with E3 Ubiquitin Ligase activity	Signaling	IR64	Indica	Constitutive	KO	90%	85%	nd	10	4	+	nd	Lesion mimic	Zeng et al. 2004; Yin et al. 2000	Os12g38210	Yes
OsPLD β 1	Phospholipase D	Signaling	Nipponbare	Japonica	Constitutive	RNAi	90%	70%	nd	nd	nd	+	nd	Lesion mimic	Yamaguchi et al. 2009	Os10g38060	Yes
OsSSI2	Steroyl Acyl Carrier FA Desaturase	Signaling	Nipponbare	Japonica	Constitutive	RNAi and KO	95%	90%	nd	nd	nd	+	nd	Lesion mimic	Jiang et al. 2009	Os01g69080	Yes
OsRac1	rac-like GTP-binding protein 2	Signaling	Kinmaze	Japonica	Constitutive	Active form	20%	46%	nd	nd	nd	+	+	Lesion mimic	Kawasaki et al. 1999; Ono et al. 2001; Thao et al. 2007	Os01g12900	Yes
NH1	Regulatory protein	Signaling	TP309	Japonica	Constitutive	OX	No effect	95%	Susceptibility to white-backed planthopper	nd	nd	+	nd	Lesion mimic	Yuan et al. 2007; Chern et al. 2005	Os01g09800	Yes
OsAOS2	ALLENE OXIDE SYNTHASE (P450 74A2)	signaling	Nipponbare	Japonica	Inducible	OX	85%	nd	nd	nd	nd	+	+	nd	Mei et al. 2006	Os03g12500	Yes
OsGH3.1	Indole-3-acetic acid-amido synthetase	signaling	Bomba	Japonica	Constitutive	OX	51%	nd	nd	nd	nd	+	nd	Reduced height	Domingo et al. 2009	Os01g57610	Yes
OsGAP1	GTPase-activating protein	signaling	Aichi asahi	Japonica	Constitutive	OX	nd	55%	nd	nd	3	+	nd	nd	Cheung et al. 2008	Os02g22130	Yes
OsDR8	Thiazole biosynthetic enzyme 1-1	signaling	Minghui63	Indica	Constitutive	RNAi	Yes	350% increase	nd	nd	nd	-	-	nd	Wang et al. 2006	Os07g34570	no
OsWRKY13	WRKY TF protein	TF	Minghui63	Indica	Constitutive	OX	Yes	Yes	nd	nd	nd	+	nd	Susceptible to abiotic stress	Qiu et al. 2007; Qiu et al. 2009a, b;	Os01g54600	Yes
OsWRKY31	WRKY TF protein	TF	Zhonghua 17	Japonica	Constitutive	OX	67%	nd	nd	nd	nd	+	nd	Root growth affected	Zhang et al. 2008	Os06g30860	Yes
OsWRKY45	WRKY TF protein	TF	Nipponbare	Japonica	Constitutive	OX	100%	nd	nd	nd	nd	+	nd	Reduced height	Shimono et al. 2007	Os05g25770	Yes
OsWRKY71	WRKY TF protein	TF	Nipponbare	Japonica	Constitutive	OX	nd	71%	nd	nd	nd	+	nd	nd	Liu et al. 2007	Os02g08440	Yes
OsWRKY53	WRKY TF protein	TF	Nipponbare	Japonica	Constitutive	OX	Yes	nd	nd	nd	nd	+	nd	None	Chujo et al. 2007	Os05g27730	Yes
OsNAC6	NAC domain-containing protein 48	TF	Nipponbare	Japonica	Constitutive and stress-inducible	OX	Yes	nd	nd	nd	nd	nd	nd	Reduced height/improved abiotic resistance	Nakashima et al. 2007	Os01g66120	Yes
RBBI2-3	Serine proteinase inhibitor	PR	TP309	Japonica	Constitutive	OX	100%	nd	nd	5	nd	nd	nd	None	Qu et al. 2003	Os01g03360	Yes
GNS1	1,3;1,4-beta glucanase	PR	Nipponbare	Japonica	Constitutive	OX	Yes	nd	nd	nd	nd	+	+	Lesion mimic	Nishizawa et al. 2003	Os05g31140	Yes
OsDR10	Unknown	other	Minghui63	indica	Constitutive	RNAi	nd	95%	nd	nd	+	+	+	None	Xiao et al. 2009	Os08g05960	Yes
pi21	Proline-rich protein	other	Aichiasahi	Japonica	Constitutive	RNAi	90%	no effect	nd	10	na	No change	nd	None	Fukuoka et al. 2009	Os04g32850	Yes
OsSBP	Selenium-binding protein homologue	other	Kinmaze	Japonica	Constitutive	OX	50%	50%	nd	nd	nd	+	+	nd	Sawada et al. 2004	Os01g68770	Yes

OX over-expresser, KO knockout mutant

Back to article page