Gene | Name | Molecular function | Refs | Phenotype |
---|---|---|---|---|
RAL1 | RADICLELESS 1 | ND | Scarpella et al. [80] | Radicle formation, vascular development, procambium |
RAL2 | RADICLELESS 2 | ND | Hong et al. [35] | Â |
ARL1 | ADVENTITIOUS ROOTLESS 1 | LOB Class I | Liu et al. [67] | Crown rootless |
CRL1 | CROW ROOT LESS 1 | LOB Class I | Inukai et al. [39] | Crown rootless |
CRL2 | CROW ROOT LESS 2 | ND | Inukai et al. [37] | Crown rootless |
LRT1/RM109 | LATERAL ROOT LESS 1 | ND | Chhun et al. [6] | Lateral rootless, resistance to 2,4-D, altered root gravity |
LRT2 | LATERAL ROOT LESS 2 | ND | Wang et al. [92] | Lateral rootless, resistance to 2,4-D, altered root gravity |
RH2 | ROOT HAIRLESS 2 | ND | Suzuki et al. [88] | Root hairless |
SRT1/RM1/RM2 | SHORT-ROOT 1 | ND | Ichii and Ishikawa [36] | Reduced root length |
SRT2/LM10 | SHORT-ROOT 2 | ND | Liang and Ichii [65] | Root cell length |
SRT3 | SHORT-ROOT 3 | ND | Yi et al. [96] | ND |
SRT4 | SHORT-ROOT 4 | ND | Ichii and Ishikawa [36] | ND |
SRT5 | SHORT-ROOT 5 | ND | Yao et al. [95] | Sugar deficiency, inhibition of root length |
SRT6 | SHORT-ROOT 6 | ND | Yao et al. [94] | ABA insensitive, inhibition of early root elongation |
ALF1/AEM1 | ALTERED LATERAL ROOT FORMATION 1 | ND | Debi et al. [16] | Shorter lateral roots and proliferation of lateral roots |
RRL1 | REDUCED ROOT LENGTH | ND | Inukai et al. [38] | Reduced root length for mature cells |
RRL2 | REDUCED ROOT LENGTH | ND | Inukai et al. [38] | Reduced root length, meristem size, RAM cell divisions |
RT1 | ROOT GROWTH INHIBITING 1 | ND | Fustuhara and Kitano [27] | Root elongation, root number |
ARM1 | AUXIN RESISTANT MUTANT 1 | ND | Chhun et al. [7] | Resistance to 2,4-D, fewer lateral roots, shorter roots |
ARM2 | AUXIN RESISTANT MUTANT 2 | ND | Chhun et al. [7] | Resistance to 2,4-D, fewer lateral roots, auxin uptake |
DES | DIAMETER OF SEMINAL ROOT | ND | Wan et al. [91] | ND |
OSHOX1 | ORYZA SATIVA HOMEOBOX 1 | HD-Zip transcription factor | Meijer et al. [69] | Procambium cell fate commitment |
GLR3.1 | GLUTAMATE RECEPTOR 3.1 | Glutamate receptor | Li et al. [64] | QC, RAM mitotic activity |
OSSCR | ORYZA SATIVA SCR | GRAS transcription factor | Kamiya et al. [46] | QC, endodermis asymmetric cell division |
QHB | QUIESCENT CENTER SPECIFIC HOMEOBOX | HB transcription factor | Kamiya et al. [47] | RAM QC |
OSCYT-INV1 | ORYZA SATIVA CYT-INV1 | Alkaline/neutral invertase | Jia et al. [41] | Root cell length reduced |
OSGNA1 | ORYZA SATIVA GLUCOSAMINE-6-P ACETYLTRANSFERASE | glucosamine-6-P acetyltransferase | Jiang et al. [44] | Root elongation |