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Table 4 Atlantys Reverse Transcriptase Genetic Variability in the Oryza

From: Rapid and Differential Proliferation of the Ty3-Gypsy LTR Retrotransposon Atlantys in the Genus Oryza

Species # T Pi (JC) K
O. punctata 2 491 0.09082 42.000
O. australiensis 20 287 0.24818 59.874
O. minuta 24 324 0.25810 69.156
O. officinalis 13 339 0.21980 61.923
O. coarctata 6 400 0.27617 91.867
O. ridleyi 34 294 0.20654 52.226
O. granulata 11 374 0.11796 40.636
O. alta 26 295 0.17319 44.702
Interspecies 137 245 0.3263 63.978
  1. Values refer to the RTs tracts used in this study
  2. Pound symbol Total number of sequences analyzed, T number of total sites, Pi-JC estimate of nucleotide diversity according to Jukes–Cantor, K average number of nucleotide differences (between all pairs of sequences)