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Rice
Fig. 3 | Rice

Fig. 3

From: Integrating Association Mapping, Linkage Mapping, Fine Mapping with RNA Seq Conferring Seedling Vigor Improvement for Successful Crop Establishment in Deep Sown Direct-Seeded Rice

Fig. 3

(a) The combined approaches involving genome-wide association mapping, linkage mapping and fine mapping followed by transcriptome based RNA-seq analysis identifying genomic region and putative candidate genes associated with mesocotyl elongation on chromosome 7 under deep sown direct-seeded rice cultivation conditions (b) validation of 6 putative candidate genes by RT-qPCR studies (c) validation of LOC_Os07g25150 on a panel of 6 genotypes constituting 3 with longer and 3 with short/no mesocotyl length by RT-qPCR studies (d) gene structure of the validated candidate gene LOC_Os07g25150 (codes for Myb-30 transcription factor) (e) protein sequence of the validated candidate gene LOC_Os07g25150 (codes for Myb-30 transcription factor) (f) Interplay between Ethylene induced EIN-3 and Myb30 regulates mesocotyl elongation

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