Identification of Candidate Genes that Affect the Contents of 17 Amino Acids in the Rice Grain Using a Genome-Wide Haplotype Association Study

Wang, Xiaoqian; Xie, Lihong; Fang, Jiachuang; Pang, Yunlong; Xu, Jianlong; Li, Zhikang

doi:10.1186/s12284-023-00658-9

Rice

Table 1 The top five rice accessions with the highest contents of each of the 17 amino acids

From: Identification of Candidate Genes that Affect the Contents of 17 Amino Acids in the Rice Grain Using a Genome-Wide Haplotype Association Study

ID	Asp	Thr	Ser	Glu	Gly	Ala	Cys	Val	Met	Ile	Leu	Tyr	Phe	Lys	His	Arg	Pro	Total
IRIS_313.8412	1.56	0.56	0.77	3.02	0.66	0.95	0.28	0.80	0.08	0.43	1.29	0.35	0.86	0.62	0.39	1.27	0.23	14.12
CX237	1.54	0.53	0.73	2.81	0.66	0.96	0.24	0.83	0.04	0.54	1.26	0.43	0.82	0.64	0.38	1.34	0.29	14.04
IRIS_313.9560	1.38	0.51	0.69	2.63	0.57	0.83	0.24	0.72	0.09	0.49	1.15	0.44	0.74	0.53	0.31	1.12	0.20	12.64
IRIS_313.11796	1.31	0.47	0.64	2.47	0.59	0.88	0.24	0.69	0.13	0.44	1.08	0.39	0.73	0.60	0.36	1.14	0.33	12.49
IRIS_313.7778	1.34	0.49	0.66	2.49	0.57	0.84	0.22	0.68	0.00	0.47	1.10	0.43	0.76	0.61	0.34	1.07	0.42	12.49
IRIS_313.7832	1.36	0.50	0.67	2.56	0.57	0.83	0.22	0.68	0.00	0.46	1.11	0.36	0.72	0.55	0.33	1.13	0.43	12.48
B051	1.40	0.52	0.67	2.46	0.59	0.79	0.25	0.69	0.06	0.46	1.07	0.40	0.73	0.60	0.35	1.16	0.21	12.41
IRIS_313.11731	1.25	0.47	0.63	2.49	0.57	0.88	0.23	0.73	0.06	0.47	1.09	0.33	0.74	0.58	0.32	1.08	0.40	12.32
IRIS_313.10067	1.46	0.54	0.67	1.74	0.62	0.88	0.25	0.76	0.09	0.48	1.10	0.36	0.74	0.64	0.36	1.24	0.35	12.28
IRIS_313.11297	1.25	0.46	0.63	2.40	0.56	0.81	0.26	0.73	0.11	0.47	1.06	0.35	0.67	0.56	0.33	1.10	0.33	12.08
IRIS_313.10333	1.40	0.50	0.65	2.38	0.56	0.78	0.22	0.65	0.04	0.43	1.04	0.38	0.69	0.55	0.33	1.05	0.40	12.05
IRIS_313.11802	1.22	0.45	0.62	2.43	0.54	0.85	0.22	0.72	0.08	0.48	1.09	0.34	0.73	0.55	0.31	1.05	0.37	12.05
CX225	1.34	0.50	0.63	2.50	0.56	0.82	0.22	0.70	0.04	0.44	1.05	0.32	0.69	0.53	0.31	1.06	0.29	12.00
IRIS_313.11307	1.19	0.47	0.60	2.29	0.54	0.78	0.27	0.66	0.13	0.43	0.97	0.34	0.66	0.57	0.32	1.02	0.26	11.50
IRIS_313.11120	1.15	0.44	0.58	2.13	0.53	0.77	0.23	0.64	0.10	0.41	0.95	0.47	0.60	0.57	0.32	0.99	0.41	11.29
IRIS_313.11261	1.14	0.44	0.59	2.34	0.51	0.76	0.26	0.68	0.10	0.42	0.98	0.30	0.66	0.50	0.30	0.98	0.29	11.25
IRIS_313.10967	1.26	0.47	0.67	1.53	0.58	0.82	0.23	0.69	0.09	0.43	1.01	0.24	0.64	0.60	0.35	1.15	0.28	11.04
IRIS_313.10224	1.26	0.47	0.67	1.63	0.53	0.80	0.24	0.66	0.04	0.45	1.04	0.34	0.68	0.51	0.30	1.00	0.41	11.03
IRIS_313.9922	1.31	0.51	0.67	1.62	0.55	0.76	0.23	0.64	0.14	0.41	0.98	0.26	0.67	0.52	0.32	1.03	0.39	11.01
IRIS_313.8571	1.26	0.48	0.67	1.58	0.52	0.75	0.22	0.65	0.14	0.41	0.97	0.25	0.66	0.50	0.30	1.00	0.39	10.75
B043	1.19	0.43	0.59	2.10	0.50	0.66	0.20	0.57	0.04	0.39	0.94	0.38	0.75	0.58	0.31	0.97	0.13	10.73
IRIS_313.9503	1.26	0.46	0.88	1.46	0.53	0.75	0.20	0.62	0.02	0.40	0.94	0.32	0.65	0.56	0.30	1.01	0.37	10.73
IRIS_313.11599	1.14	0.44	0.87	1.43	0.54	0.78	0.20	0.66	0.06	0.40	0.91	0.36	0.62	0.59	0.31	1.01	0.22	10.54
IRIS_313.10430	1.17	0.40	0.89	1.38	0.54	0.74	0.19	0.60	0.00	0.40	0.96	0.45	0.66	0.52	0.30	1.09	0.23	10.52
IRIS_313.11854	1.06	0.42	0.54	2.01	0.49	0.71	0.23	0.62	0.05	0.40	0.87	0.47	0.61	0.52	0.28	0.92	0.22	10.42
IRIS_313.10151	1.16	0.41	0.86	1.42	0.51	0.72	0.19	0.61	0.04	0.38	0.92	0.28	0.61	0.49	0.29	1.00	0.24	10.13
IRIS_313.8641	1.12	0.43	0.84	1.42	0.48	0.70	0.21	0.58	0.06	0.38	0.90	0.28	0.59	0.46	0.27	0.92	0.28	9.92
IRIS_313.11824	0.98	0.37	0.48	1.84	0.47	0.69	0.22	0.59	0.15	0.36	0.83	0.30	0.57	0.49	0.26	0.85	0.29	9.74
IRIS_313.9771	1.08	0.39	0.51	1.82	0.43	0.57	0.18	0.51	0.03	0.34	0.79	0.34	0.66	0.64	0.26	0.83	0.27	9.65

Note: The values in bold indicate the top accessions with the highest amino acid contents

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