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Rice
Fig. 2 | Rice

Fig. 2

From: Identification of Candidate Genes that Affect the Contents of 17 Amino Acids in the Rice Grain Using a Genome-Wide Haplotype Association Study

Fig. 2

Genotype distribution and the population structure of the accessions in the rice association panel. (A) The distribution of SNPs with minor allele frequency > 0.05 and missing data rate ≤ 20% on the 12 rice chromosomes. (B) The number of haplotypes for the 44,248 genes covered by the SNPs. (C) Screen plot from the STRUCTURE analysis showing the selection of Q for the association study. (D) Bayesian clustering of the 164 accessions performed using STRUCTURE. (E) Population structure revealed by 3D principal component analysis. (F) Population structure revealed by kinship analyses

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