Fig. 4From: Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome ResequencingA tanglegram phylogenetic analysis using trees from ML and BI methods to compare the difference of the two methods and illustrate the relationships of the different Oryza groups. Here, high-quality variations were applied in both analyses. a Phylogram and radial tree layout of the ML tree based on a best-fit model (SYM + G). b BI-based tree using the best-fit model JC + G. Best-fit models were evaluated using jModeltest. The tanglegram was implemented in Dendroscope using a Neighbor Net-based heuristic method, which use line connects the same accession in two trees to see the difference phylogenetic structureBack to article page