Skip to main content

Table 2 Distribution of genetic markers across the 12 chromosomes in rice

From: High-resolution QTL mapping for grain appearance traits and co-localization of chalkiness-associated differentially expressed candidate genes in rice

Chromosome

Number of bin markers

Length (cM)

Average genetic distance between markers (cM)

Maximum spacing between markers (cM)

Average physical distance between markers (Kb)

Average number of annotated gene loci among markersa

1

295

232.15

0.79

8.25

146.68

22.09

2

258

221.65

0.86

7.20

139.29

20.90

3

311

226.44

0.73

9.93

117.09

18.66

4

278

223.22

0.80

8.53

127.71

15.34

5

182

194.90

1.07

6.85

164.61

22.03

6

229

199.68

0.87

9.75

136.46

17.31

7

232

180.72

0.78

6.50

128.01

16.24

8

179

167.37

0.94

6.51

158.90

19.14

9

178

178.69

1.00

7.19

129.28

15.55

10

162

118.78

0.73

5.84

143.25

17.47

11

208

213.82

1.03

9.37

139.52

15.42

12

199

186.26

0.94

9.37

138.35

14.99

Overall

2711

2343.68

0.86

9.93

137.68

18.12

  1. a annotation on Os-Nipponbare-Reference-IRGSP-1.0 (http://rapdb.dna.affrc.go.jp/)