Table 1 List of the 147 Myanmar accessions assayed
From: Specific patterns of genetic diversity among aromatic rice varieties in Myanmar
ID | Variety name | Region of origin | Ecosystem | EG | Structure | Aroma | Genotype | Genotype | Haplotype |
|---|---|---|---|---|---|---|---|---|---|
group | 8 bp del. | 3 bp ins. | |||||||
MSB_1158 | BAHAN HMWE | Ayeyarwady Division | RL | u | 1 | Ar | P | A | H1 |
MSB_1774 | BAY KYAR | Sagaing Division | RL | u | m | Ar | A | A | H12 |
MSB_3708 | BAY KYAR PAW SAN | Yangon Division | RL | u | 5B | Ar | A | P | H5 |
MSB_325 | CHIN KAUK HNYIN | Sagaing Division | u | u | 1 | Ar | A | A | H7 |
MSB_1898 | EMAHTA HMWE | Kachin State | RL | u | 1 | Ar | A | A | H7 |
MSB_2297 | KAMAR KYI SAW | Mon State | RL | u | 5B | Ar | A | P | H5 |
MSB_6071 | KAUK HNYIN HMWE | Shan State | u | u | 1 | Ar | P | A | H1 |
MSB_6108 | KAUK HNYIN NET | Shan State | u | u | 5B | Ar | A | P | H5 |
MSB_6097 | KAUK HNYIN PHYU | Shan State | u | u | 5B | Ar | A | P | H5 |
MSB_371 | KAUK HNYIN SAW | Kachin State | u | u | 1 | Ar | u | A | ns |
IRGC_58069 | KYET PAUNG | Semi-arid zone | u | 5 | 5A | Ar | P | A | H1 |
MSB_235 | KYET PAUNG SAN | Sagaing Division | RL | u | 1 | Ar | A | A | H7 |
MSB_1932 | KYWET THWAR | Yangon Division | u | u | 1 | Ar | A | A | H10 |
MSB_7293 | MAN AUNG KAUK YIN | Rakhine State | u | u | 5B | Ar | A | A | H4 |
MSB_398 | MEE DON YIN | Mandalay Division | u | u | 5B | Ar | A | A | H3 |
MSB_829 | MYA WAR NGA CHEIK | Sagaing Division | u | u | 1 | Ar | u | A | H6 |
MSB_2283 | NAMATHALAY | Sagaing Division | u | u | 5A | Ar | P | A | H1 |
MSB_1809 | NAT PYI HMWE | Bago Division | u | u | 5B | Ar | u | u | H4 |
MSB_1382 | NGA BYA YIN KAUK HNYIN NET | Sagaing Division | u | u | 5B | Ar | A | P | H5 |
MSB_1777 | NGA CHEIK | Kachin State | u | u | 5B | Ar | A | A | H4 |
MSB_5884 | NGA CHEIK | Chin State | u | u | 1 | Ar | A | A | H13 |
MSB_6101 | NGA CHEIK KAUK HNYIN | Shan State | u | u | 1 | Ar | A | A | ns |
MSB_1790 | NGA KYWE | Bago Division | RL | u | 1 | Ar | u | A | ns |
MSB_56 | NGA KYWE | Mon State | RL | u | 5B | Ar | A | A | H2 |
MSB_1105 | NGA KYWE (U TO) | Ayeyarwady Division | RL | u | 5B | Ar | A | A | ns |
MSB_1638 | NGA KYWE NOTE | Bago Division | RL | u | 5B | Ar | A | A | H4 |
MSB_348 | NGA KYWE PHYU | Ayeyarwady Division | u | u | 1 | Ar | A | A | ns |
MSB_352 | NGA KYWE PHYU | Ayeyarwady Division | RL | u | 1 | Ar | A | A | H7 |
MSB_1114 | NGA KYWE TAUNG PYAN | Ayeyarwady Division | RL | u | 5B | Ar | A | A | ns |
MSB_1799 | NGA KYWE TAUNG PYAN | Yangon Division | RL | u | 1 | Ar | A | A | H2 |
MSB_1789 | NGA KYWE YIN | Kayin State | RL | u | 5B | Ar | A | P | H5 |
MSB_410 | NGA KYWE YIN | Ayeyarwady Division | RL | u | 5B | Ar | A | A | ns |
MSB_1871 | NGA PYA GYI | Mandalay Division | RL | u | 5B | Ar | A | P | H5 |
IRGC_33552 | PATHEIN NYUNT | Ayeyarwady delta zone | u | 5 | 5B | Ar | A | P | H5 |
MSB_2579 | PAW SAN BAY KYAR | Ayeyarwady Division | RL | u | 5B | Ar | A | P | H5 |
MSB_2877 | PAW SAN BAY KYAR | Ayeyarwady Division | RL | u | 1 | Ar | u | A | H7 |
MSB_2925 | PAW SAN BAY KYAR | Ayeyarwady Division | RL | u | 5B | Ar | u | A | ns |
MSB_3163 | PAW SAN BAY KYAR | u | RL | u | 5B | Ar | u | P | ns |
MSB_804 | PAW SAN BAY KYAR | Ayeyarwady Division | RL | u | 5B | Ar | u | P | H5 |
MSB_807 | PAW SAN BAY KYAR | Ayeyarwady Division | RL | u | 5B | Ar | A | A | H2 |
MSB_1207 | PAW SAN HMWE | Ayeyarwady Division | u | u | 5B | Ar | A | P | H5 |
MSB_1641 | PAW SAN HMWE | Ayeyarwady Division | RL | u | 1 | Ar | A | A | ns |
MSB_2082 | PAW SAN HMWE | u | RL | u | 1 | Ar | u | A | ns |
MSB_2502 | PAW SAN HMWE | Ayeyarwady Division | RL | u | 1 | Ar | A | A | H6 |
MSB_2620 | PAW SAN HMWE | Ayeyarwady Division | RL | u | 5B | Ar | u | P | ns |
MSB_5802 | PAW SAN HMWE | u | RL | u | 1 | Ar | u | A | ns |
MSB_6973 | PAW SAN HMWE BAY KYAR | Rakhine State | RL | u | 5B | Ar | u | P | H5 |
MSB_7005 | PAW SAN HMWE KAUK YIN | Rakhine State | RL | u | 5B | Ar | A | A | H2 |
MSB_2577 | PAW SAN SHWE WAR | Ayeyarwady Division | u | u | 5B | Ar | A | A | H2 |
MSB_2924 | PAW SAN TAUNG PYAN HMWE | Yangon Division | u | u | 5B | Ar | u | A | H2 |
MSB_1128 | PAW SAN YIN | Ayeyarwady Division | RL | u | 5B | Ar | A | P | H5 |
MSB_163 | SABA NET | Mandalay Division | RL | u | 1 | Ar | A | A | ns |
MSB_2261 | SABA NET | Kayah State | RL | u | m | Ar | u | A | H6 |
MSB_1915 | SABA NET KAUK YIN | Mandalay Division | I | u | 5B | Ar | u | A | ns |
MSB_682 | SABANI HMWE | Tanitharyi Division | RL | u | 1 | Ar | P | A | H1 |
MSB_75 | SHWE WAR KAUK HNYIN | Yangon Division | u | u | 1 | Ar | A | A | H2 |
MSB_1628 | TAUNG PYAN HMWE | Kayin State | RL | u | 1 | Ar | A | A | H9 |
MSB_1621 | TAUNG PYAN SA BA NET | Bago Division | RL | u | m | Ar | A | A | H9 |
MSB_6096 | TAUNG YAR KAUK HNYIN | Shan State | u | u | 1 | Ar | A | A | H2 |
MSB_1786 | THET NU SABA NET PYAN | Yangon Division | RL | u | 5B | Ar | u | A | H4 |
MSB_1791 | TYAUNG PYAN YIN | Ayeyarwady Division | RL | u | 1 | Ar | u | A | H1 |
MSB_1792 | TYAUNG PYAN YIN | Bago Division | RL | u | 5B | Ar | u | A | H4 |
IRGC_32293 | YANGON SABA | Southern plain zone | u | 5 | 5B | Ar | A | P | ns |
MSB_788 | YAR KAUK HNYIN | Shan State | RL | u | 1 | Ar | A | A | ns |
MSB_2528 | YWA LWE | Kachin State | RU | u | 1 | Ar | A | A | H7 |
MSB_311 | AUNG LAN DAW | Bago Division | RL | u | 1 | Na | A | A | ns |
IRGC_32959 | BALUGUN KAUKKYI | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
MSB_537 | BAW GYI | Ayeyarwady Division | RL | u | 1 | Na | A | A | ns |
MSB_211 | BU DO THE | Shan State | RU | u | 1 | Na | A | A | ns |
MSB_769 | BU RO | Kayin State | RL | u | 1 | Na | A | A | ns |
MSB_2587 | BU SABA | Tanitharyi Division | RL | u | 1 | Na | A | A | H14 |
IRGC_6804 | D 44-1 | Southern plain zone | u | 5 | 5B | Na | A | A | H3 |
MSB_635 | EPA TINE | Kayin State | RL | u | 1 | Na | A | A | ns |
MSB_2512 | KALA GYI NGA SEIN | Mon State | RL | u | 1 | Na | A | A | ns |
MSB_498 | KAUK KYI THEE DAT | Bago Division | RL | u | 1 | Na | A | A | ns |
IRGC_33191 | KAUKKYI MEEDON | Ayeyarwady delta zone | u | 5 | 1 | Na | A | A | ns |
MSB_240 | KHAO KHAN NEW | Shan State | RU | u | 1 | Na | A | A | ns |
MSB_263 | KHAO LONE KHONE | Shan State | RU | u | 1 | Na | A | A | ns |
MSB_158 | KHAO MON HAN YOUNG | Kayah State | RU | u | 1 | Na | A | A | ns |
MSB_519 | KHAO NWAN | Shan State | RU | u | 1 | Na | A | A | ns |
MSB_218 | KHAO SING SAUK | Shan State | RU | u | 1 | Na | A | A | ns |
MSB_353 | KYAR GALAY | Mon State | RL | u | 1 | Na | A | A | ns |
MSB_728 | KYAW KHAW | Kachin State | RU | u | 1 | Na | A | A | ns |
MSB_230 | KYEE MASHE | Mandalay Division | RL | u | 1 | Na | A | A | ns |
IRGC_33280 | KYEEARNI | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33282 | KYEEME | u | u | 5 | 5B | Na | u | u | ns |
IRGC_33283 | KYEENI | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33287 | KYWEKYUT MEEDON | Ayeyarwady delta zone | u | 5 | m | Na | A | A | ns |
IRGC_33301 | LAWTHAWPHINME (E62-10) | Southern coastal zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33304 | LEIKKALAY MEEDON | Southern plain zone | u | 5 | 5B | Na | A | A | H2 |
MSB_2560 | LET TAW YWE BAW | Mon State | RL | u | 1 | Na | A | A | ns |
MSB_577 | LONE PHYU | Mon State | u | u | 1 | Na | A | A | ns |
MSB_285 | MA PO LAY | Ayeyarwady Division | RL | u | 1 | Na | A | A | ns |
IRGC_33373 | MAYZI | Western coastal zone | u | 5 | m | Na | A | A | ns |
IRGC_33379 | MEEDON YIN | Semi-arid zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33380 | MEEDON YOYO | Ayeyarwady delta zone | u | 5 | 1 | Na | A | A | ns |
MSB_109 | NAGA NEW | Rakhine State | RL | u | 1 | Na | A | A | ns |
IRGC_58152 | NGA KYWE GYI | Western coastal zone | u | 5 | m | Na | A | A | H6 |
MSB_404 | NGA YUN WAR | Bago Division | RL | u | 1 | Na | A | A | ns |
IRGC_33466 | NGAKYEIN THEE SHAY | Western coastal zone | u | 5 | 1 | Na | A | A | ns |
IRGC_33467 | NGAKYWE | Ayeyarwady delta zone | u | 5 | m | Na | A | A | ns |
IRGC_33468 | NGAKYWE | Ayeyarwady delta zone | u | 5 | m | Na | A | A | ns |
IRGC_33469 | NGAKYWE | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_11142 | NGAKYWE TAUNG PYAN | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33478 | NGA-KYWE YIN | Eastern plateau | u | 5 | 5B | Na | A | A | H2 |
IRGC_58154 | NGAYA PAUK | Western coastal zone | u | 5 | m | Na | A | A | ns |
IRGC_33521 | NGAYUN TAUNGPYAN | Southern plain zone | u | 5 | 1 | Na | A | A | ns |
IRGC_58172 | PATEEPU/OO PAUK | Southern plain zone | u | 5 | 5A | Na | A | A | ns |
IRGC_33551 | PATHEIN NGAKYWE | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33590 | POKEKYI | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33596 | PYAPON THEEDAT | Ayeyarwady delta zone | u | 5 | m | Na | A | A | ns |
IRGC_33605 | SABANET KAUKYIN | Semi-arid zone | u | 5 | 5B | Na | A | A | ns |
IRGC_58191 | SAN KAR YAN THAE | Southern plain zone | u | 5 | 6 | Na | A | A | H2 |
MSB_234 | SAN SHWE NI | Bago Division | RL | u | 1 | Na | A | A | ns |
MSB_66 | SHWE NI TWAT SUN | Yangon Division | RL | u | 1 | Na | A | A | ns |
IRGC_33668 | SHWEDINGA | Semi-arid zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33704 | SHWEWA | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33708 | SHWEWA HNAN | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33709 | SHWEWA KAMAKYI | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33706 | SHWEWAGYI | Ayeyarwady delta zone | u | 5 | 1 | Na | A | A | ns |
IRGC_33712 | SHWEWAYIN | Southern plain zone | u | 5 | 1 | Na | A | A | ns |
MSB_217 | TADAUNG PO | Ayeyarwady Division | D | u | 1 | Na | A | A | ns |
MSB_1403 | TAR SAING | Kachin State | RU | u | 1 | Na | A | A | ns |
IRGC_33745 | TAUNGDI | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33747 | TAUNGGYI KAUKKYI | Eastern plateau zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33752 | TAUNGPYAN | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33755 | TAUNGPYAN KAUKNGE | Ayeyarwady delta zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33757 | TAUNGPYANYIN | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33749 | TAUNGTI | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33773 | THATNU SABANET | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
MSB_984 | THEE DAT PYA PON | Ayeyarwady Division | RL | u | 1 | Na | A | A | ns |
MSB_67 | THEE HTAT NGA SEIN | Yangon Division | RL | u | 1 | Na | A | A | H6 |
MSB_647 | THEE HTAT PIN KHINE | Sagaing Division | RL | u | 5A | Na | A | A | H2 |
IRGC_33791 | THIT PIN | Western coastal zone | u | 5 | m | Na | A | A | ns |
MSB_65 | THONE HNAN PWA | Yangon Division | RL | u | 1 | Na | A | A | ns |
IRGC_33805 | THONESATOE NGAKWE | Southern plain zone | u | 5 | 5B | Na | A | A | ns |
IRGC_33802 | THONSATOE | Semi-arid zone | u | 5 | 2 | Na | A | A | ns |
MSB_113 | TIN TANE | Kachin State | RL | u | 1 | Na | A | A | ns |
MSB_925 | WA KHE MA HNAN KAR | Ayeyarwady Division | D | u | 1 | Na | A | A | ns |
IRGC_33835 | WUNKYAW | Southern plain zone | u | 5 | 1 | Na | A | A | ns |
IRGC_58247 | YAT SAUK SABA | Eastern plateau zone | u | 5 | m | Na | A | A | ns |
MSB_91 | YAY MA NAING MIN THAR GYI | Yangon Division | D | u | 1 | Na | A | A | H7 |
MSB_33 | ZAWTIKA GYI | Yangon Division | RL | u | 1 | Na | A | A | ns |
MSB_233 | ZEIN YIN | Bago Division | RL | u | 1 | Na | A | A | ns |
IRGC_33192 | KAUKKYISAW | Southern coastal zone | u | 5 | 5B | u | A | A | H6 |
IRGC_5946 | NGAKYWE D 25-4 | Southern plain zone | u | 5 | m | u | A | A | H6 |
IRGC_33888 | YELAIK MEEDON | u | u | 5 | 5B | u | A | A | H2 |